Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2976 ATGCAAGCTGGTTTAATGATTCCAGCTAGTAACATGCATTCAATGATCGGAAGAAACAACAATAACGTTGGTGTCTTTGGTTTATCTTCATCTCTCTCTTTATCCCAGCCAAATCTAATGGAAGCTGGACAACATCATCAACTTCTACCATTTGACATGACACAAAACAACAATAATACTTCAGAAAGTGATGTTCCAAGAATCCGTGAAGATGAATTATTCGACAGTGCTACGAAATCTGGTAACAGTGAAAATCAAGAAGCTGCTAATTCTGGTGAAGATCAAGAACCTCGTGCTAAGAAGAAACGTTATCACCGTCATACACAGCATCAGATCCAAGAAATGGAAGCGTTTTTTAAGGAATGTCCACACCCTGATGACAAGCAAAGGAAGGAACTAAGCAGAGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTTTGGTTTCAGAACAAACGTACTCAAATGAAGACTCAACAGGAGAGGCATGAGAATACTTCACTTAGAACTGAAAATGAGAAACTTCGCGCTGATAACATGAGGTTTAGAGAAGCTCTAAGTAATGCTTCTTGTCCTAATTGTGGTGGACCAACTGCTATCGGAGAAATGTCGTTTGATGAACATCACTTGAGGATTGAAAATTCTCGCCTTCGAGAAGAGATTGATAGGATATCTGCCATTGCTGCCAAGTACGTAGGGAAGCCAGTGGTGAGCTATCCACTCCTCTCCCCTTCATCGGTTCCTCCTCGTCCTCTAGAACTCGGCATTGGTGGTTTCGGAGGACAACCAGGAATGGGAGGAGATATGTATGGAGCTGGAGATCTTCTTAGATCAATAAGTGGACCGACCGAAGCCGATAAACCGATGATAATTGAGCTAGCTGTTGCTGCTATGGAGGAACTCATTGGAATGGCACAAATGGGTGATCCACTTTGGTTGCCTACACTTGAAGGAGGTTCCATACTCAATGAGGAGGAATATGTTAGGTCTTTTCCTAGAGGAATTGGTCCAAAACCAGCTGGTTTTAAATGTGAAGCTTCAAGAGAATCTTCTGTTGTCATCATGAATCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAGTTTTTTCTGGCATTGTCTCAAGAGCAATGACATTGGAAGTGCTATCAACTGGGGTGGCAGGGAACTACAATGGTGCATTACAAGTGATGACAGCAGAACTGCAAGTACCTTCACCACTTGTGCCAACTAGAGAGAGTTATTTTGTAAGGTATTGTAAGCAACATGCTGATGGAACTTGGGCAGTAGTGGATGTTTCTTTGGACAATTTACGCCCTAGTCCTTCTGCCAGATCAAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCAAAGGTTATATGGGTTGAGCATGTTGAAGTGGATGATAGAGGTGTTCATAATCTATACAAGCAGCTTGTTAGTTCTGGACATGCATTTGGTGCAAAACGTTGGATTGCAACCCTAGATCGACAATGTGAAAGACTTGCTAGTGCCATGGCAACAAACATTCCCACGGTCGATGTTGGCGTGATAACAAACCAAGATGGGAGAAAGAGTATGTTGAAACTAGCTGAAAGAATGTGTATAAGCTTTTGTGCTGGAGTGAGTGCCTCAACAGCACACACGTGGACAACACTTTCGGGTACAGGAGCTGATGATGTAAGGGTCATGACCCGTAAGAGTGTAGATGACCCAGGAAGACCAGCTGGCATTGTTCTAAGTGCTGCAACTTCTTTTTGGCTTCCAGTGCCACCAAAAAGAGTTTTTGAATTTCTTAGAGATGAAAACTCAAGAAGTGAGTGGGATATCCTTTCCAATGGTGGAGTTGTCCAAGAAATGGCACATATTGCTAATGGAAGAGATACTGGAAATTGTGTTTCTCTACTTCGAGTGAATAGTGCAAATTCAAGCCAAAGCAACATGTTGATATTGCAAGAGAGTTGTACGGATACAACAGGGTCATTTGTGATATATGCACCTGTAGACATAGTTGCAATGAATGTGGTTCTAAATGGAGGGGATCCAGATTATGTAGCACTTCTTCCATCTGGATTTGCTATACTACCAGATGGGACAACCACAAATGGAGGAGGTGTTGGTGAAACTGGACATGGTGGTGGATCTCTATTGACTGTTGCATTTCAAATATTGGTCGATTCCGTTCCAACGGCAAAACTTTCTCTTGGATCTGTTGCTACGGTTAATAATCTTATTGCTTGTACTGTTGAGAGGATTAAGGCTTCTTTGTCTGGTGAAGTTGCTTGA 2313 0.4237 MQAGLMIPASNMHSMIGRNNNNVGVFGLSSSLSLSQPNLMEAGQHHQLLPFDMTQNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGEDQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFGGQPGMGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLWLPTLEGGSILNEEEYVRSFPRGIGPKPAGFKCEASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTTNGGGVGETGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2976 770 MobiDBLite consensus disorder prediction 78 110 - -
Mtr2g2976 770 CDD START_ArGLABRA2_like 286 509 - -
Mtr2g2976 770 Pfam START domain 292 510 IPR002913 GO:0008289
Mtr2g2976 770 SUPERFAMILY Homeodomain-like 92 159 IPR009057 -
Mtr2g2976 770 SUPERFAMILY Bet v1-like 530 762 - -
Mtr2g2976 770 Gene3D - 337 507 IPR023393 -
Mtr2g2976 770 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 767 IPR042160 -
Mtr2g2976 770 SMART HOX_1 99 162 IPR001356 GO:0003677
Mtr2g2976 770 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Mtr2g2976 770 ProSiteProfiles START domain profile. 282 513 IPR002913 GO:0008289
Mtr2g2976 770 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Mtr2g2976 770 SUPERFAMILY Bet v1-like 282 512 - -
Mtr2g2976 770 CDD homeodomain 101 159 IPR001356 GO:0003677
Mtr2g2976 770 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 54 767 - -
Mtr2g2976 770 Coils Coil 164 184 - -
Mtr2g2976 770 Gene3D - 85 174 - -
Mtr2g2976 770 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Mtr2g2976 770 SMART START_1 291 510 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2976 Mtr-Chr2 43404059 43411142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2976 34 770 Homeobox Transcription Factor Family AT1G05230 76.653 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr2g2976 START 3.1e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2976 K09338 - gmx:100797992 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2976 2 43404059 43411142 Mtr2g2976 2 43404059 43411142 ECH
Mtr2g2976 2 43404059 43411142 Mtr4g1412 4 25057984 25065446 PCT