Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g2955 | ATGGCCAGTGGAGGCCTTGGACTCTCCATTGATTCAGATCCAAATTCAAGCTTCTTATACCATAAACAAATAGAATTCTCAACTCTTTTCCTCAACACAACAACTCCAAAAACTTCAAGTGGAAACTTATATAGTCACAAAATGGATACCACAAACAACAAAAACAAAAACAAAAACAAAAACAAATCTCCATTTCAAGTCAACCATGAAATATCTCATCAACCATTTGATCATGAAATGAGACCTATCATCAATGAACTAGACTTTTTCTCTCAAAACAATAACCATCACAATCATTCATCTGCATCTGCATCTGCCTCTACCTCTACACCTCCCTCACTAAATCTTCATCATCATCATATAAATGATCATTACACCGATCCTTCTCTCTTGGAATTCAAAGTAAACACTAGTTTGAATCTTCTCACCACCAACACAAGCAATGATCAATCCATGATGGAGGAAGACATAGCAAGTGATTCAGAAGACAAAAGAGCTAAGCTTGAGCTCGTCGTTCTTCAAGCTGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAGCAAAAACAAGTGATGGGTGGAAAACTTGATGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCGAGACAATTTATGGAGCTTGGATTGCCTGCTAATCATTCTGATGCTATTGATGAACCAAGAAGTCAAGATCAGTCAAAATCACTTGCAAACAACAATGAGGAAGGTTCCAAGGATGAAGAACTTGTGTTAGATCATGACAAAAAGGAATCTGATCGGGGAAATGAGAGAAACGGTAGTCCTGCTGATCGAGTTTTAGCTGCTAATAATAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTCGAGCTCGATCCGAGGCTAACATGATCAATGATGGGTGTCAATGGAGAAAGTACGGACAGAAAATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCTTTAGGTTGTCCGGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACACCACATTCATGCTTTGCCTCCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTGCTGTCAGGACCAATGACAAGTGCAGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACTGTTACATTGGACCTAACTCAGTCACCAAATCAAAACCAGTTCCCTAATAACCACTCAAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTTTTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACTGCAGCTTTAGCAGCTGCTATTACTTCAATTATTGGGGCGGCGCAGCCAAACAATAACAACGGTACTAGCAATAATGGTAACGGTACAATAGCTAATAACAGTAATGGCAATGTTACATCAAGTAACAATACCAATGGAAGCCCTAAAATCAACAATCCCAACTCTTCAGTAGAGTAG | 1809 | 0.4002 | MASGGLGLSIDSDPNSSFLYHKQIEFSTLFLNTTTPKTSSGNLYSHKMDTTNNKNKNKNKNKSPFQVNHEISHQPFDHEMRPIINELDFFSQNNNHHNHSSASASASTSTPPSLNLHHHHINDHYTDPSLLEFKVNTSLNLLTTNTSNDQSMMEEDIASDSEDKRAKLELVVLQAELERMKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEQKQVMGGKLDEEKQNGNGGVLVPRQFMELGLPANHSDAIDEPRSQDQSKSLANNNEEGSKDEELVLDHDKKESDRGNERNGSPADRVLAANNNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNQNQFPNNHSNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNGTIANNSNGNVTSSNNTNGSPKINNPNSSVE* | 603 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g2955 | 602 | Gene3D | WRKY domain | 333 | 410 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 91 | 121 | - | - | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 216 | 239 | - | - | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 91 | 116 | - | - | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 37 | 66 | - | - | |
Mtr2g2955 | 602 | PANTHER | OS05G0567200 PROTEIN | 75 | 581 | - | - | |
Mtr2g2955 | 602 | Pfam | WRKY DNA -binding domain | 349 | 406 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr2g2955 | 602 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 75 | 581 | IPR044810 | GO:0003700 | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 254 | 319 | - | - | |
Mtr2g2955 | 602 | SUPERFAMILY | WRKY DNA-binding domain | 341 | 409 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 275 | 301 | - | - | |
Mtr2g2955 | 602 | ProSiteProfiles | WRKY domain profile. | 343 | 409 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr2g2955 | 602 | MobiDBLite | consensus disorder prediction | 560 | 602 | - | - | |
Mtr2g2955 | 602 | SMART | WRKY_cls | 348 | 408 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr2g2955 | 602 | Coils | Coil | 163 | 197 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g2955 | Mtr-Chr2 | 43155615 | 43159333 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g2955 | 135 | 571 | WRKY Transcription Factor Family | AT1G62300 | 48.696 | 9.00e-122 | 369 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mtr2g2955 | WRKY | 3.3e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g2955 | - | - | gmx:100127384 | 553.518 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mtr2g2955 | 2 | 43155615 | 43159333 | Mtr2g2955 | 2 | 43155615 | 43159333 | ECH | |
Mtr2g2955 | 2 | 43155615 | 43159333 | Mtr2g0842 | 2 | 8526807 | 8529598 | ECH | |
Mtr2g2955 | 2 | 43155615 | 43159333 | Mtr4g4940 | 4 | 63541489 | 63543915 | ECH | |
Mtr2g2955 | 2 | 43155615 | 43159333 | Mtr4g1457 | 4 | 25884352 | 25887901 | PCT |