Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2939 ATGTCAATGGATATGAATATGATGGCTACAAATGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACTACTCTAGCGGTTAGTGTTCCATGCAGTAGCTTGCTGACTATAGTGACAGTTAGATGTGGTCATTGTGCTAATTTGCTTTCTGTTAACATGGGAGCAACATCACTTCAATCTTTTACTCCTCAACAAGATCACCCTCAGAAACAGCAGCTTATAAACTGTCATCAAGAAGCAAGCAGGAAGGAAGTTGTAGGATCATCATCATCATCATCATCTTCTTCTTCAAAGTGCAAAGCATTTCAGCCTTTAGTCCATGAGCAACCTAGGACTCCTCCAATTCGTCCTCCAGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCTAGTAATCCAGATATCAGTCACAGGGAAGCATTTAGCACAGCAGCTAAAAACTGGGCACATTTTCCTCACATTCACTTTGGATTAAAGTTGGATGGTAGCAAGCAAGCAAAGTTGGACCATGGGGTTGGGGAAGCTACTCAAAAGTCTAACGGATTCTATTGA 588 0.4099 MSMDMNMMATNERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGATSLQSFTPQQDHPQKQQLINCHQEASRKEVVGSSSSSSSSSSKCKAFQPLVHEQPRTPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDHGVGEATQKSNGFY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2939 195 MobiDBLite consensus disorder prediction 85 125 - -
Mtr2g2939 195 MobiDBLite consensus disorder prediction 85 103 - -
Mtr2g2939 195 PANTHER PROTEIN YABBY 6-RELATED 9 195 IPR006780 GO:0007275
Mtr2g2939 195 PANTHER AXIAL REGULATOR YABBY 2-RELATED 9 195 - -
Mtr2g2939 195 SUPERFAMILY HMG-box 108 163 IPR036910 -
Mtr2g2939 195 Gene3D High mobility group box domain 108 166 IPR036910 -
Mtr2g2939 195 Pfam YABBY protein 10 170 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2939 Mtr-Chr2 43012985 43019418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2939 1 195 C2C2-YABBY Transcription Factor Family AT1G08465 61.307 7.98e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mtr2g2939 YABBY 2.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2939 K25796 - gmx:100785458 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2939 2 43012985 43019418 Mtr4g1478 4 26164739 26172642 PCT