Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g2932 | ATGATTCAACCTCAAACCTATTTAAATGTAGCCGATAATAGCGGAGCCCGCGAATTGATGTGTATTCGAATCATAGGAGCTAGTAATCGACGGTATGCTTATATTGGTGACATTGTTGTTGCTGTAATCAAAAAAGCAGTACCAAATTCATCTTTAGAAAGATCTGAAGTGATCAGGGCTGTAATTGTACGTACTTGTAAAGAACTAAAACGTAGTAATGGTATAATAATAAAGTATGATGATAATGCGGCGGTTCTCATTGATAAAGAAGGAAATCCAAAAGGAACTCGAATTTTTTCCGCAATAGCCCGAGAATTGAGACAGTTAAATTTTGTGACTGTTACAGATGTACGAGGTCGGGTGATTTCTTGGTCCTCTGCCGGTTCGTGTGGATTCAAGGGTACACGAAGGGGGACACCATTTGCCGCTCAAACCGCAGCAGCAAATGCTATTCGAACAGTAGTAGATCAAGGCATGCAACGAGCCGTAGTCATAATAAAAGGTCCCGGTGACAGTTCTATTACTATTCCATTAGTATTTTATATTCTATGA | 552 | 0.3967 | MIQPQTYLNVADNSGARELMCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSLERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVLIDKEGNPKGTRIFSAIARELRQLNFVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGDSSITIPLVFYIL* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g2932 | 183 | Pfam | Ribosomal protein L14p/L23e | 1 | 116 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | PANTHER | 50S/60S RIBOSOMAL PROTEIN L14/L23 | 1 | 120 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | Hamap | 50S ribosomal protein L14 [rplN]. | 1 | 122 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | Gene3D | Ribosomal protein S11 | 114 | 177 | IPR036967 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | Gene3D | Ribosomal protein L14 | 1 | 113 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | Pfam | Ribosomal protein S11 | 111 | 171 | IPR001971 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | PANTHER | 50S RIBOSOMAL PROTEIN L14, CHLOROPLASTIC | 1 | 120 | - | - | |
Mtr2g2932 | 183 | ProSitePatterns | Ribosomal protein L14 signature. | 60 | 86 | IPR019972 | - | |
Mtr2g2932 | 183 | SUPERFAMILY | Translational machinery components | 111 | 171 | - | - | |
Mtr2g2932 | 183 | SUPERFAMILY | Ribosomal protein L14 | 1 | 115 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Mtr2g2932 | 183 | TIGRFAM | rplN_bact: ribosomal protein uL14 | 1 | 122 | IPR005745 | GO:0003735|GO:0006412|GO:0015934 | |
Mtr2g2932 | 183 | SMART | Ribosomal_L14_2 | 1 | 122 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g2932 | Mtr-Chr2 | 42937727 | 42938564 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g2932 | 8 | 109 | Cytoplasmic Ribosomal Protein Gene Family | AT3G04400 | 36.792 | 1.25e-15 | 68.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g2932 | K02874 | K02948 | pop:112323782 | 238.81 |