Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2932 ATGATTCAACCTCAAACCTATTTAAATGTAGCCGATAATAGCGGAGCCCGCGAATTGATGTGTATTCGAATCATAGGAGCTAGTAATCGACGGTATGCTTATATTGGTGACATTGTTGTTGCTGTAATCAAAAAAGCAGTACCAAATTCATCTTTAGAAAGATCTGAAGTGATCAGGGCTGTAATTGTACGTACTTGTAAAGAACTAAAACGTAGTAATGGTATAATAATAAAGTATGATGATAATGCGGCGGTTCTCATTGATAAAGAAGGAAATCCAAAAGGAACTCGAATTTTTTCCGCAATAGCCCGAGAATTGAGACAGTTAAATTTTGTGACTGTTACAGATGTACGAGGTCGGGTGATTTCTTGGTCCTCTGCCGGTTCGTGTGGATTCAAGGGTACACGAAGGGGGACACCATTTGCCGCTCAAACCGCAGCAGCAAATGCTATTCGAACAGTAGTAGATCAAGGCATGCAACGAGCCGTAGTCATAATAAAAGGTCCCGGTGACAGTTCTATTACTATTCCATTAGTATTTTATATTCTATGA 552 0.3967 MIQPQTYLNVADNSGARELMCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSLERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVLIDKEGNPKGTRIFSAIARELRQLNFVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGDSSITIPLVFYIL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2932 183 Pfam Ribosomal protein L14p/L23e 1 116 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 120 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 Gene3D Ribosomal protein S11 114 177 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 Gene3D Ribosomal protein L14 1 113 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 Pfam Ribosomal protein S11 111 171 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 PANTHER 50S RIBOSOMAL PROTEIN L14, CHLOROPLASTIC 1 120 - -
Mtr2g2932 183 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Mtr2g2932 183 SUPERFAMILY Translational machinery components 111 171 - -
Mtr2g2932 183 SUPERFAMILY Ribosomal protein L14 1 115 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mtr2g2932 183 TIGRFAM rplN_bact: ribosomal protein uL14 1 122 IPR005745 GO:0003735|GO:0006412|GO:0015934
Mtr2g2932 183 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2932 Mtr-Chr2 42937727 42938564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2932 8 109 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.792 1.25e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2932 K02874 K02948 pop:112323782 238.81