Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2920 ATGGGAGTTATGTTGATAGAACAAATTTCCAAGTTGATATGTTTTTGTTCAATCATTACAATATGCTTTGGTGCTACAAATCCTAATGATCTAAAAGTTTTGAATGATTTTAGAAAAGGGATGGAAAATCCAGAGCTCTTGAAATGGCCAGAAAAAGGTAACAATGATCCTTGTGGTCCTCCATCATGGCCTTATGTGTTTTGTTCTGATGATAGAGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGAACATTGCCACAAAACTTTAACCAACTCTCAGAACTCTACAATTTAGGTCTTCAACGAAACAATCTTACCGGAATGTTGCCTAGTTTTCGCGGTTTATCAAAATTGGAATTCGCTTTCTTGGATTACAATTCATTTGAAGCTATCCCTTTTGATTTCTTCAATGGATTAACAAGCCTTAGGGTTTTGTCTTTGGAGGAAAATCAACTCAATGTTAGTACTAATGGATGGTTATTTCCTTTGGATTTGGAAAAATCGGTTCAGTTAACTAATCTTTCTTTGGTTCATTGTAATTTGGTTGGTTCATTGCCTGATTTTCTAGGCACATTGCCATCTCTCACAAATCTAAGGCTTTCAAACAACAAATTTTCGGGTCCGATTCCGGCTACTTTTGCTCAATCTTCAATTCAGGTTCTGTGGTTGAATAACCAAGAAGGAGAAGGTGGTTTTACAGGTTCAATTGATGTTATTGCTTCAATGGTTTTCTTAACACAGATTTGGCTACATGGAAACAAGTTTTCAGGTACAATTCCATACAATATTGGAAATCTCACTTCTTTGAAGGAACTCAATGTCAATAGCAATCAATTTGTTGGGTTGATTCCACAATCCTTAGCAGAAATGAATCTTGATTTACTTGTTTTGAACAATAATATGCTAATGGGTCCAATACCAAAGTTTAAAGCTGCAAACTTTACTTATGATGATAATCTATTTTGTCAAACTGAGCCAGGACTTGAATGTTCACCAGAAGTTACTGCACTGCTTGATTTTCTGAACAATCTGAATTATCCGTTGTTTCTAATTTCCGATTGGTCAGGTAATAAACCATGCACAAGTAGTACAGGACCATGGTTTGGATTAAGCTGCAATTCAAACTCTGTATCTATAATTAATCTACCAAAACATAAGCTTAATGGTAGTTTAAGTCCTTCACTTGCTAAGTTAAACTCACTTCTTGAAATTAGGCTCGCTGGAAATAATATAACCGGCACAGTTCCTAGTGATTTTACTAAATTGAAATCATTGAAGTTGTTGGATTTAAGTGACAATAATCTTGAATCTCCGTTACCGGATTTTCATGATGGTGTGAAGGTTATTACTGTTGGTAACCCATTTCTTAATAATCAAACTGGAGGGAGTGTTAGTCCTACTATTAGTGGCCCGAGTTCGGCAAAAAACCCTTCACATTCTCCATCTTCACTTAATCAGCTAGTTCCAAGCTCAAATCACAAAAGTTTCAAGACAGTAGCAACAGTGGCTGGAGTTGCAGTGTTTGCAGTTGTAGCTTTTGTGGTTCTTTATCTCTTTTTATGTTTCTTCAAGAACAAGAAAACCTCATTGGACGTGCCGAGTTCGATTGTGGTTCACCCTCGAGATCCGTCTGATTCGAACAATGTATTTAAAATTGCTGTTTCAAGCAATAACACTAGAAGCTTATCAGGAAAAACTGGGACAAGTTCTCTGAGTAGCTTAAGTGGTGAAACTCAAAACTCTTACTTTATTGAGTCTGGTAACCATGTTATATCAGTGCAAGTGCTACGCAAGGTTACAAACAATTTTGCATCGGAAAATGAACTAGGCCGCGGTGGATTTGGAACTGTTTACAAGGGGGAATTAGAAGATGGAACCAATATAGCAGTGAAGAGAATGGAGAATGGAGCTATTGGAAGTAAGGCATTGGATGAGTTTCAATCTGAAATAGATGTTCTTTCTAAGGTTCGTCACCGACATTTGGTATCTCTTTTGGGGTATTCCATTGAAGGAAATGAGAGACTTTTAGTTTATGAGTATATGCCACTTGGGGCTCTAAGTCAGCATCTTTTTCATTGGAAAAAGTTCGAGTTCAAGCCGTTGTCTTGGGCACAAAGACTTGTAATAGCCCTAGATGTTGCTAGAGGAATGGAATATCTTCACGGTCTCGCTCGCGAGACCTTTATCCATAGAGATCTCAAGTCCTCTAATATTCTACTAGGCGATGACTTTCGTGCAAAAGTTTCGGATTTTGGTCTTGTAAAACTTGCCCCGAATGGTGAAAAATCTGTGGTAACCAAACTTGCTGGAACATTTGGTTATCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTATGGCGTGGTTTTAATGGAACTTCTAACCGGACTAACGGCACTTGATGAGAGCCGGTCAGAGGAAATCCGATACTTGGCCGAATGGTTTTGGCGAATTAAATCTAACAAAGAAAAGCTTATGGCTGCCCTTGATCCAGCTTTGGAACCAAACGACGAAACACATGAAAGTATAACTATTGTAGCAGAACTTGCTGGACACTGCACTGCTAGGGAAGCATACCATAGGCCAGATATGAGTCATGCTGTCAATGTACTATCAGCACTAGTGGAGAAATGGCGACCAGTTGATGATGAATTCGATTGCTATTCTGCTGTTGAAGACACTCGACAACTTCCTCAATTGTTGAAAATTTGGAAGGATGCAGAAAGCAGTGAGTTTAGCTATAGTGCTGCTAGTCTTGAAGATAGTAAAGGAAGTATTGCAGTGAGGCCTACTGGATTTGCTGACTCTTTCACTTCTGCTGATGCTAGATGA 2862 0.385 MGVMLIEQISKLICFCSIITICFGATNPNDLKVLNDFRKGMENPELLKWPEKGNNDPCGPPSWPYVFCSDDRVTQIQAKNLGLRGTLPQNFNQLSELYNLGLQRNNLTGMLPSFRGLSKLEFAFLDYNSFEAIPFDFFNGLTSLRVLSLEENQLNVSTNGWLFPLDLEKSVQLTNLSLVHCNLVGSLPDFLGTLPSLTNLRLSNNKFSGPIPATFAQSSIQVLWLNNQEGEGGFTGSIDVIASMVFLTQIWLHGNKFSGTIPYNIGNLTSLKELNVNSNQFVGLIPQSLAEMNLDLLVLNNNMLMGPIPKFKAANFTYDDNLFCQTEPGLECSPEVTALLDFLNNLNYPLFLISDWSGNKPCTSSTGPWFGLSCNSNSVSIINLPKHKLNGSLSPSLAKLNSLLEIRLAGNNITGTVPSDFTKLKSLKLLDLSDNNLESPLPDFHDGVKVITVGNPFLNNQTGGSVSPTISGPSSAKNPSHSPSSLNQLVPSSNHKSFKTVATVAGVAVFAVVAFVVLYLFLCFFKNKKTSLDVPSSIVVHPRDPSDSNNVFKIAVSSNNTRSLSGKTGTSSLSSLSGETQNSYFIESGNHVISVQVLRKVTNNFASENELGRGGFGTVYKGELEDGTNIAVKRMENGAIGSKALDEFQSEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKKFEFKPLSWAQRLVIALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRIKSNKEKLMAALDPALEPNDETHESITIVAELAGHCTAREAYHRPDMSHAVNVLSALVEKWRPVDDEFDCYSAVEDTRQLPQLLKIWKDAESSEFSYSAASLEDSKGSIAVRPTGFADSFTSADAR* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2920 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Mtr2g2920 953 PANTHER OSJNBA0070M12.3 PROTEIN 9 953 - -
Mtr2g2920 953 Gene3D Transferase(Phosphotransferase) domain 1 683 900 - -
Mtr2g2920 953 SUPERFAMILY Protein kinase-like (PK-like) 582 881 IPR011009 -
Mtr2g2920 953 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Mtr2g2920 953 Gene3D Ribonuclease Inhibitor 334 494 IPR032675 -
Mtr2g2920 953 Gene3D Phosphorylase Kinase; domain 1 567 682 - -
Mtr2g2920 953 SMART serkin_6 605 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2920 953 SUPERFAMILY L domain-like 334 447 - -
Mtr2g2920 953 PANTHER OSJNBA0070M12.3 PROTEIN 9 953 - -
Mtr2g2920 953 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Mtr2g2920 953 Pfam Leucine rich repeat N-terminal domain 334 375 IPR013210 -
Mtr2g2920 953 MobiDBLite consensus disorder prediction 462 489 - -
Mtr2g2920 953 SUPERFAMILY L domain-like 26 310 - -
Mtr2g2920 953 ProSiteProfiles Protein kinase domain profile. 605 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2920 953 Pfam Protein tyrosine and serine/threonine kinase 608 879 IPR001245 GO:0004672|GO:0006468
Mtr2g2920 953 Gene3D Ribonuclease Inhibitor 28 329 IPR032675 -
Mtr2g2920 953 CDD STKc_IRAK 611 881 - -
Mtr2g2920 953 SMART LRR_typ_2 400 423 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 194 217 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 424 446 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 268 291 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 94 116 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 117 140 IPR003591 -
Mtr2g2920 953 SMART LRR_typ_2 141 164 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2920 Mtr-Chr2 42757625 42761426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2920 85 874 Receptor kinase-like Gene Family AT1G55610 29.870 9.67e-78 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mtr2g2920 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2920 - - cam:101493565 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2920 2 42757625 42761426 Mtr2g2920 2 42757625 42761426 ECH