Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2912 ATGGATCAGTATGAGATCATGGAGCAGATCGGTCGCGGTGCATTTGGTGCTGCAATTCTCGTTAATCACAAGGTGGAGAAGAAAAGATATGTGTTGAAGAAAATTAGGCTTGCTAGGCAAACGGAACGGTGTAGAAGATCTGCTCATCAAGAGGGTTGCTATGTTTGCATTGTTACTGGATACTGTGAAGGTGGAGACATAGCAGCATTGATGAAAAAATCGAATGGGGCTTACTTTCCTGAAGAGAAACTTTGCAAATGGGTTACTCAATTATTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTGCACCGTGACCTAAAGTGTTCTAACATCTTTCTCACCAAGGATCATGATGTTCGCTTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCTGATGATTTGACTTCCTCGGTTGTAGGAACTCCGAACTATATGTGCCCTGAACTGCTTACAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCACCGCCCTGCTTTCAAAGCTTTTGATTTGGATGGATTGATAAGCAAGATCAACCGTTCCTCTATTGGTACTTTGCCTCCCTGTTATTCTCCATCCTTGAAAACACTGATAAAAGGCATGTTAAGGAAAAACCCCGAGCATCGTCCAACAGCATCCGATATCTTAAAGCACCCTTATTTGCAGCCTTATGTTCATCAATATTGTTCATCTCTCTGTTCTCCATCAGCCTCTTCTCCTGAAAAGCCAATTTTTGCTGTCCATGTTCCTCGAAAAAACATGGCAGAAAGTGAAGAAAGTAATAGTTCGAGTAGTGACAAAGGTGGTTTGATGTCAAATAAGAGAAACGTTTCAAAAGCAGCACCAATGGGCGATGAAAAAATCACTGAGGTAGACCTGTCAATGATCGATGATAATGGGTCTGACCTTATCATGCCCGGTAGAGAAAGAAACAGCTCTAGCAATGTCAACGCCAAAACAGATAAACAGGAGGTTAGGAAGCAAACTCACCTTGAACACAATTCTAATGTTGGATATAAGCTAGCAAGAACAGTTAAGAATGTAAAGATGGGACCAAAACATGAAAAGGTTAAAGAGACGAGGTCTCCAATGAGAGAAAGTCTGATGAAGGCTGGTGGTATATCAACACAGAAAATTAATACAGAAACCTTGTCTAAATTTCCGAAATCCGATTTTGGTGTAAATGGTTTGAAGCCTAATGTAGAGGTGCCAACCTTAGCACCTTCAAAAGCAACCCTTCATTCTTCAAAACGAATCCAGGGATCACATACTTCAAAATATCAGCAGTTACCGATGATAGAATCTACACCAAAAACTAAACCTCGACATAAGGTGACACCACCATGTGGTCCTATCAAACAAGTAGTAGCAGTACCTGGAGTTTCTGCAAGGCCAAAACAAAAGACTCCTCCAAGCCTACTTAAGCCACCCTCATTTCTGGGACGCATAAAGCAAGCCGGGCATGATATGCCAAATGCAGCAAATGATACAGAAAGGTTAGATCCAAATAAAATAGGTCAGGAGGCTAAGATGGGACATCATCGGTTGCCTAACGGTCATCTGCCACATGTTTCTAAAGAGCCTTTGAAGGCTTTTGAAAGTAGTACCAAAGGAATGCAAGCAACCAGCAACTCTGTTTCATCTTCAGTCTCTATTCAAGGATTTGAACTTTTTGACTTTGCAAACACTTTTATTGACTTGAGTGAACCAACACCCCCTGAACATGGGAGTTTTAATCACACTGAAATTGTGGGATCACGTGCCAACAGTGGTGGTCCTGATGAAAATATTTCTGGTGAATCCTCTCAGTTTACACCAACTTTTCAGAATACCATTACTCGTAATGAGAAAGTAAGTCCCAGGTTAACTCTGGATCACTCAGTAATGTATGATAGTTTTCTTATAAATCAAACAACTACATCTGATGTCGTTGAGTGTGATGTTCCGTCTGCCAAAGTCACACAAGAAATCAAAAACCTTCAAGATATTTGTAAGGAAATGGCTTCAATCAATTCTCTCAAACATTCACTTTCCATTTCTGGAAAAAAGTCTGTTTGTGAAGTTAGTCCAGTAAGCTTGCCAAATAATAGGCCTCATAAAGTTAGCCAGCCAAAGCTTATGTACATCTCAACTGGTGATGACAAGTTCATGGTGAGGGAAAGAGTGTCCTCAGTGGCTGAAATTGCACCTCTGAATATATCTACTAAAATTTCAAGCCAGAAAGTTTTAGAAGAAGAGAAGGGAATGGTTTTACAGAATCTAGCAACAGAAAGGCCTGCTTCTGGCCATCTTCCCCCAGCTTTTGATGATGTCATCCATGTTATACGCCATAGCAGTTACCGGGTGGGGAGTGATCTTCCGGTAAAGGAATCAACGGAGAAGGGAGTTACAAATGTAGATGTTGGTACACTCATCAACGTTGTAAAGGATGATTTAGAAATGAGAAATGTGGGAACTCCTTTGTCCCTTAAATCTTCAAATTGCTCTGAAGTTACTAGCTTGAACTCAAATACTACTGATAATTTGGAAATCAGAAACTTGAGCTTGAAGTCAAGTATTTCTGAACATCCTGATGTTGAAGTGCTAGATGTGAGAATCCCTGATTCTCTAGTTTCAGAACCTGGTTCCGCTAAATATAACAAATATAGCATTCCTACAGCCAAAGAGGAAATGCCAGGAAATGAATCTTTTGATGTTAAATCTTCCAAACAGAGAGCTGATGCACTTGAAGGGCTGTTAGAATTGTCTGCAGATTTGCTGCAGCAAAATAGATTGGAGGAACTTGCGGTTGTTCTGAAGCCCTTTGGAAAAGATAAGGTCTCCTCAAGGGAGACAGCTATTTGGTTGGCCAAGAGTTTAAAAGGATTGATGGTTGAGGAAAGTGGGGGTCGTAGTTAG 2943 0.406 MDQYEIMEQIGRGAFGAAILVNHKVEKKRYVLKKIRLARQTERCRRSAHQEGCYVCIVTGYCEGGDIAALMKKSNGAYFPEEKLCKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDLDGLISKINRSSIGTLPPCYSPSLKTLIKGMLRKNPEHRPTASDILKHPYLQPYVHQYCSSLCSPSASSPEKPIFAVHVPRKNMAESEESNSSSSDKGGLMSNKRNVSKAAPMGDEKITEVDLSMIDDNGSDLIMPGRERNSSSNVNAKTDKQEVRKQTHLEHNSNVGYKLARTVKNVKMGPKHEKVKETRSPMRESLMKAGGISTQKINTETLSKFPKSDFGVNGLKPNVEVPTLAPSKATLHSSKRIQGSHTSKYQQLPMIESTPKTKPRHKVTPPCGPIKQVVAVPGVSARPKQKTPPSLLKPPSFLGRIKQAGHDMPNAANDTERLDPNKIGQEAKMGHHRLPNGHLPHVSKEPLKAFESSTKGMQATSNSVSSSVSIQGFELFDFANTFIDLSEPTPPEHGSFNHTEIVGSRANSGGPDENISGESSQFTPTFQNTITRNEKVSPRLTLDHSVMYDSFLINQTTTSDVVECDVPSAKVTQEIKNLQDICKEMASINSLKHSLSISGKKSVCEVSPVSLPNNRPHKVSQPKLMYISTGDDKFMVRERVSSVAEIAPLNISTKISSQKVLEEEKGMVLQNLATERPASGHLPPAFDDVIHVIRHSSYRVGSDLPVKESTEKGVTNVDVGTLINVVKDDLEMRNVGTPLSLKSSNCSEVTSLNSNTTDNLEIRNLSLKSSISEHPDVEVLDVRIPDSLVSEPGSAKYNKYSIPTAKEEMPGNESFDVKSSKQRADALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSSRETAIWLAKSLKGLMVEESGGRS* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2912 980 SMART serkin_6 4 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2912 980 CDD STKc_Nek 3 236 - -
Mtr2g2912 980 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mtr2g2912 980 SUPERFAMILY Protein kinase-like (PK-like) 1 278 IPR011009 -
Mtr2g2912 980 Gene3D Transferase(Phosphotransferase) domain 1 64 305 - -
Mtr2g2912 980 MobiDBLite consensus disorder prediction 586 620 - -
Mtr2g2912 980 MobiDBLite consensus disorder prediction 597 620 - -
Mtr2g2912 980 ProSiteProfiles Protein kinase domain profile. 4 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2912 980 Gene3D Phosphorylase Kinase; domain 1 1 55 - -
Mtr2g2912 980 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 964 - -
Mtr2g2912 980 MobiDBLite consensus disorder prediction 319 343 - -
Mtr2g2912 980 MobiDBLite consensus disorder prediction 271 287 - -
Mtr2g2912 980 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 964 - -
Mtr2g2912 980 Pfam Protein kinase domain 51 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2912 980 MobiDBLite consensus disorder prediction 268 300 - -
Mtr2g2912 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2912 Mtr-Chr2 42702313 42709908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2912 10 237 MAP Kinase Kinase Kinase AT1G53570 31.102 4.44e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mtr2g2912 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2912 K08857 - gmx:100780141 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2912 2 42702313 42709908 Mtr2g2912 2 42702313 42709908 ECH
Mtr2g2912 2 42702313 42709908 Mtr4g1501 4 26612765 26620328 PCT