LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g2912	ATGGATCAGTATGAGATCATGGAGCAGATCGGTCGCGGTGCATTTGGTGCTGCAATTCTCGTTAATCACAAGGTGGAGAAGAAAAGATATGTGTTGAAGAAAATTAGGCTTGCTAGGCAAACGGAACGGTGTAGAAGATCTGCTCATCAAGAGGGTTGCTATGTTTGCATTGTTACTGGATACTGTGAAGGTGGAGACATAGCAGCATTGATGAAAAAATCGAATGGGGCTTACTTTCCTGAAGAGAAACTTTGCAAATGGGTTACTCAATTATTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTGCACCGTGACCTAAAGTGTTCTAACATCTTTCTCACCAAGGATCATGATGTTCGCTTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCTGATGATTTGACTTCCTCGGTTGTAGGAACTCCGAACTATATGTGCCCTGAACTGCTTACAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCACCGCCCTGCTTTCAAAGCTTTTGATTTGGATGGATTGATAAGCAAGATCAACCGTTCCTCTATTGGTACTTTGCCTCCCTGTTATTCTCCATCCTTGAAAACACTGATAAAAGGCATGTTAAGGAAAAACCCCGAGCATCGTCCAACAGCATCCGATATCTTAAAGCACCCTTATTTGCAGCCTTATGTTCATCAATATTGTTCATCTCTCTGTTCTCCATCAGCCTCTTCTCCTGAAAAGCCAATTTTTGCTGTCCATGTTCCTCGAAAAAACATGGCAGAAAGTGAAGAAAGTAATAGTTCGAGTAGTGACAAAGGTGGTTTGATGTCAAATAAGAGAAACGTTTCAAAAGCAGCACCAATGGGCGATGAAAAAATCACTGAGGTAGACCTGTCAATGATCGATGATAATGGGTCTGACCTTATCATGCCCGGTAGAGAAAGAAACAGCTCTAGCAATGTCAACGCCAAAACAGATAAACAGGAGGTTAGGAAGCAAACTCACCTTGAACACAATTCTAATGTTGGATATAAGCTAGCAAGAACAGTTAAGAATGTAAAGATGGGACCAAAACATGAAAAGGTTAAAGAGACGAGGTCTCCAATGAGAGAAAGTCTGATGAAGGCTGGTGGTATATCAACACAGAAAATTAATACAGAAACCTTGTCTAAATTTCCGAAATCCGATTTTGGTGTAAATGGTTTGAAGCCTAATGTAGAGGTGCCAACCTTAGCACCTTCAAAAGCAACCCTTCATTCTTCAAAACGAATCCAGGGATCACATACTTCAAAATATCAGCAGTTACCGATGATAGAATCTACACCAAAAACTAAACCTCGACATAAGGTGACACCACCATGTGGTCCTATCAAACAAGTAGTAGCAGTACCTGGAGTTTCTGCAAGGCCAAAACAAAAGACTCCTCCAAGCCTACTTAAGCCACCCTCATTTCTGGGACGCATAAAGCAAGCCGGGCATGATATGCCAAATGCAGCAAATGATACAGAAAGGTTAGATCCAAATAAAATAGGTCAGGAGGCTAAGATGGGACATCATCGGTTGCCTAACGGTCATCTGCCACATGTTTCTAAAGAGCCTTTGAAGGCTTTTGAAAGTAGTACCAAAGGAATGCAAGCAACCAGCAACTCTGTTTCATCTTCAGTCTCTATTCAAGGATTTGAACTTTTTGACTTTGCAAACACTTTTATTGACTTGAGTGAACCAACACCCCCTGAACATGGGAGTTTTAATCACACTGAAATTGTGGGATCACGTGCCAACAGTGGTGGTCCTGATGAAAATATTTCTGGTGAATCCTCTCAGTTTACACCAACTTTTCAGAATACCATTACTCGTAATGAGAAAGTAAGTCCCAGGTTAACTCTGGATCACTCAGTAATGTATGATAGTTTTCTTATAAATCAAACAACTACATCTGATGTCGTTGAGTGTGATGTTCCGTCTGCCAAAGTCACACAAGAAATCAAAAACCTTCAAGATATTTGTAAGGAAATGGCTTCAATCAATTCTCTCAAACATTCACTTTCCATTTCTGGAAAAAAGTCTGTTTGTGAAGTTAGTCCAGTAAGCTTGCCAAATAATAGGCCTCATAAAGTTAGCCAGCCAAAGCTTATGTACATCTCAACTGGTGATGACAAGTTCATGGTGAGGGAAAGAGTGTCCTCAGTGGCTGAAATTGCACCTCTGAATATATCTACTAAAATTTCAAGCCAGAAAGTTTTAGAAGAAGAGAAGGGAATGGTTTTACAGAATCTAGCAACAGAAAGGCCTGCTTCTGGCCATCTTCCCCCAGCTTTTGATGATGTCATCCATGTTATACGCCATAGCAGTTACCGGGTGGGGAGTGATCTTCCGGTAAAGGAATCAACGGAGAAGGGAGTTACAAATGTAGATGTTGGTACACTCATCAACGTTGTAAAGGATGATTTAGAAATGAGAAATGTGGGAACTCCTTTGTCCCTTAAATCTTCAAATTGCTCTGAAGTTACTAGCTTGAACTCAAATACTACTGATAATTTGGAAATCAGAAACTTGAGCTTGAAGTCAAGTATTTCTGAACATCCTGATGTTGAAGTGCTAGATGTGAGAATCCCTGATTCTCTAGTTTCAGAACCTGGTTCCGCTAAATATAACAAATATAGCATTCCTACAGCCAAAGAGGAAATGCCAGGAAATGAATCTTTTGATGTTAAATCTTCCAAACAGAGAGCTGATGCACTTGAAGGGCTGTTAGAATTGTCTGCAGATTTGCTGCAGCAAAATAGATTGGAGGAACTTGCGGTTGTTCTGAAGCCCTTTGGAAAAGATAAGGTCTCCTCAAGGGAGACAGCTATTTGGTTGGCCAAGAGTTTAAAAGGATTGATGGTTGAGGAAAGTGGGGGTCGTAGTTAG	2943	0.406	MDQYEIMEQIGRGAFGAAILVNHKVEKKRYVLKKIRLARQTERCRRSAHQEGCYVCIVTGYCEGGDIAALMKKSNGAYFPEEKLCKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDLDGLISKINRSSIGTLPPCYSPSLKTLIKGMLRKNPEHRPTASDILKHPYLQPYVHQYCSSLCSPSASSPEKPIFAVHVPRKNMAESEESNSSSSDKGGLMSNKRNVSKAAPMGDEKITEVDLSMIDDNGSDLIMPGRERNSSSNVNAKTDKQEVRKQTHLEHNSNVGYKLARTVKNVKMGPKHEKVKETRSPMRESLMKAGGISTQKINTETLSKFPKSDFGVNGLKPNVEVPTLAPSKATLHSSKRIQGSHTSKYQQLPMIESTPKTKPRHKVTPPCGPIKQVVAVPGVSARPKQKTPPSLLKPPSFLGRIKQAGHDMPNAANDTERLDPNKIGQEAKMGHHRLPNGHLPHVSKEPLKAFESSTKGMQATSNSVSSSVSIQGFELFDFANTFIDLSEPTPPEHGSFNHTEIVGSRANSGGPDENISGESSQFTPTFQNTITRNEKVSPRLTLDHSVMYDSFLINQTTTSDVVECDVPSAKVTQEIKNLQDICKEMASINSLKHSLSISGKKSVCEVSPVSLPNNRPHKVSQPKLMYISTGDDKFMVRERVSSVAEIAPLNISTKISSQKVLEEEKGMVLQNLATERPASGHLPPAFDDVIHVIRHSSYRVGSDLPVKESTEKGVTNVDVGTLINVVKDDLEMRNVGTPLSLKSSNCSEVTSLNSNTTDNLEIRNLSLKSSISEHPDVEVLDVRIPDSLVSEPGSAKYNKYSIPTAKEEMPGNESFDVKSSKQRADALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSSRETAIWLAKSLKGLMVEESGGRS*	981

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g2912	980	SMART	serkin_6	4	236	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g2912	980	CDD	STKc_Nek	3	236	-	-
	Mtr2g2912	980	ProSitePatterns	Protein kinases ATP-binding region signature.	10	33	IPR017441	GO:0005524
	Mtr2g2912	980	SUPERFAMILY	Protein kinase-like (PK-like)	1	278	IPR011009	-
	Mtr2g2912	980	Gene3D	Transferase(Phosphotransferase) domain 1	64	305	-	-
	Mtr2g2912	980	MobiDBLite	consensus disorder prediction	586	620	-	-
	Mtr2g2912	980	MobiDBLite	consensus disorder prediction	597	620	-	-
	Mtr2g2912	980	ProSiteProfiles	Protein kinase domain profile.	4	236	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g2912	980	Gene3D	Phosphorylase Kinase; domain 1	1	55	-	-
	Mtr2g2912	980	PANTHER	SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE	1	964	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g2912	Mtr-Chr2	42702313	42709908	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g2912	10	237	MAP Kinase Kinase Kinase	AT1G53570	31.102	4.44e-29	121

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NEK	Mtr2g2912		Pkinase	5.2e-48	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g2912	K08857		-	gmx:100780141	1278.85

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g2912	2	42702313	42709908	Mtr2g2912	2	42702313	42709908	ECH
	Mtr2g2912	2	42702313	42709908	Mtr4g1501	4	26612765	26620328	PCT

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