Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2906 ATGGAGATTGTTGTTTCAAAGGAAGCTCAGATGTCTATTGCTGCTTCATCTATGTTTCCTGGTTTTAGATTCTGTCCTACTGATGAAGAGTTGATTTCTTATTACCTTAGAAAAAAATTAGATGGTCATGAAGAAAGTGTTCAAGTTATTTCTGAGGTTGAGCTTTGTAAATATGAACCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAGTGGTTCTTCTTCTCTCCTCGTGGAAGAAAGTATCCAAATGGTTCACAAAGTAAAAGAGCTACCGATTGTGGCTATTGGAAAGCCACTGGAAAAGAGCGCAACGTGAAATCGGGTTCTAACGTCATAGGTACGAAGCGAACTTTGGTGTTTCACTTAGGCCGTGCCCCTAAAGGAGAAAGGACAGAATGGATTATGCACGAGTACTGTGTCAGTGACAGGTCTCCGGATTCTTTGGTTGTTTGTCGTCTCAAGAGGAACACGGAGTTTCGTGTTAACGATGCTTCAAATAGAGCTTCTTCAAGTCAAATAAATCCTGTACATTCACATGAAAGTGATTGTGCTGGTCAAATAAACCCAGTAAATTCACATGAAAGTAATTGTGCTATCTCAGAAGGCGGTACTGATCATAGAGAAAGGGGTATCTGTGAACAAGAAAAGGAGGTTGATGGTAGTTCGAAACGGGGAAGCAGCAGTTATGGTTCAGCTTCAATGGAACAAATTGATTCTATGTCTGAATCAAATCAGCGACCAGCTAATGACGGTTTTTTGACAGACTCTTCGGGCCAGCTAAAGATGGATGAAGAGGATTGTTATGCTGAGATATTAAGGAATGATATCATAAAATTAGATGAATCATCAATGTCTCAAGGAGCTCAAACAAGACCAAATAACCTTGCACATTCTCATCCATGCCAAGGCACTGCACAACGGAGAATACGATTAAGGGTTCCGAAATCAACGCATTCTCAACCAGGAGCTCGTTTCTCAAAAACAATGCACCAGTCCAAGAGTAGCTTCATTGCCAGAATGACGAACCGTTTGATGATATTTGCTTTCTTCGTTTTCACTCTCACGGCTATATTATTTTGGTCTTCATTGGGTGGTCACAAACAAGTTAGAAATATTGTAGGAAAATTTCAGGTGTAA 1149 0.4012 MEIVVSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVSDRSPDSLVVCRLKRNTEFRVNDASNRASSSQINPVHSHESDCAGQINPVNSHESNCAISEGGTDHRERGICEQEKEVDGSSKRGSSSYGSASMEQIDSMSESNQRPANDGFLTDSSGQLKMDEEDCYAEILRNDIIKLDESSMSQGAQTRPNNLAHSHPCQGTAQRRIRLRVPKSTHSQPGARFSKTMHQSKSSFIARMTNRLMIFAFFVFTLTAILFWSSLGGHKQVRNIVGKFQV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2906 382 MobiDBLite consensus disorder prediction 227 260 - -
Mtr2g2906 382 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Mtr2g2906 382 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Mtr2g2906 382 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 377 - -
Mtr2g2906 382 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 377 - -
Mtr2g2906 382 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Mtr2g2906 382 MobiDBLite consensus disorder prediction 218 262 - -
Mtr2g2906 382 MobiDBLite consensus disorder prediction 167 193 - -
Mtr2g2906 382 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2906 Mtr-Chr2 42618345 42621083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2906 5 301 NAC Transcription Factor Family AT2G27300 48.148 2.02e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2906 NAM 7.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2906 - - mtr:MTR_2g086880 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2906 2 42618345 42621083 Mtr2g2906 2 42618345 42621083 ECH