Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2890 ATGGCACCGAAGAAGGCAGCACCACCACCGTCATCAAAGCCAGCGAAATCAGGAGGAGGAAAGCAAAAGAAGAAGAAATGGAGCAAAGGTAAACAAAAGGAAAAGGTTAACAACATGGTCTTGTTTGATCAAGGTACCTATGATAAGCTTCTCACTGAAGCTCCCAAATACAAACTCATCACTCCTTCAGTCCTCTCCGATCGTCTCAGGATTAATGGATCTTTGGCACGTCGTGCAATCAGAGATTTGATGGCAAGAGGATTGATTAGGTTGGTGTCTGCTCATTCTAGTCAGCAGATTTACACTAGAGCCACTAATACATAG 324 0.4383 MAPKKAAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIRDLMARGLIRLVSAHSSQQIYTRATNT* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2890 107 PANTHER BNAA04G12260D PROTEIN 2 107 - -
Mtr2g2890 107 MobiDBLite consensus disorder prediction 1 35 - -
Mtr2g2890 107 Pfam S25 ribosomal protein 10 104 IPR004977 -
Mtr2g2890 107 Gene3D - 20 107 - -
Mtr2g2890 107 PANTHER 40S RIBOSOMAL PROTEIN S25 2 107 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2890 Mtr-Chr2 42506235 42507068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2890 1 107 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.963 1.89e-52 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2890 K02975 - ming:122063087 158.688