Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2880 ATGGCGAGCCAAAGAATAGGAGAACTTGATTTTTCTGAGACAGGACATTCAACTCATCATGTCCCTTATGGAATTCATCATAGGATTAATAATAATAATCCTTCATCAAGCTTAATGAATGAAGAATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATTGTTTTGCAAGGAGTTAAGAATGGAAATGATGAAACAAAAGCATCTTTTTTCACAGCCAGACCTGCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAACCTCAACAGTAGGAGGTGGTAACAAATCAGGAGGTGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAGCCAGAATCACCCTTAAGTAGTAAAAAAGCATCTTCTTTTTCATCAGATCATAATAATAATATGGATCAGCAGAATCTTCAGCTACAACAACAGAAGATGATAATATCCAATGATGCTTCTGCTGCTATAAGAACAGCCTCTTCATCACAGAATCAAATATCAGCAGCAGCCAAAGAAAAGAAAAAAGGAGCTGGTTCAACATCAGATAAGCCACTTGATGCAAAGACATTGAGACGTTTAGCACAAAACAGGGAGGCTGCAAGGAAAAGTCGTCTAAGGAAAAAGGCTTATGTGCAACAACTTGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAGTGGTGGTGTTGGAGGCAATATAAGCTCTGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTGCAAGCGGCGTTAACAGATAATGAAATGAGAGTAATGGTGGATGGATATTTGTGTCATTATGATCAAATATTTAGACTCAAAGGTGTCACTGCTAAATCAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCTTCTGAAATTATCATGATGTTGATCCAACAATTGGAGCCACTAGCTGAGCAGCAGATAATGGGGATGTATGGACTGAGGCATTCTTCTCAGCAAGCAGAGGAAGCTCTCTCACAAGGACTTGACCAGTTGCAACAGTCTCTTGTTGACACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCTATAGGCAAGCTTTCCAATCTTGAAGGTTTTCTTCGCCAGGCCGATAACTTGAGGCAACAAACTCTTCACCAATTATGTCGATTACTCACACTTCGTCAAGCAGTACGCTCTTTTCTTGTTATTGGAGAATATTATGGACGACTTCGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGAACATGATCAGTGATGATAACTCATGCCAAACAACAACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCACAAATTTCTGA 1494 0.4029 MASQRIGELDFSETGHSTHHVPYGIHHRINNNNPSSSLMNEESGFDFGELEEAIVLQGVKNGNDETKASFFTARPAATLEMFPSWPMRFHQTSTVGGGNKSGGESSDSALSSKNENPFEPESPLSSKKASSFSSDHNNNMDQQNLQLQQQKMIISNDASAAIRTASSSQNQISAAAKEKKKGAGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMFMDWSGGVGGNISSGGAMFDMEYGRWLEEDNRLLTELRNGLQAALTDNEMRVMVDGYLCHYDQIFRLKGVTAKSDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAIGKLSNLEGFLRQADNLRQQTLHQLCRLLTLRQAVRSFLVIGEYYGRLRALSSLWASRPRENMISDDNSCQTTTDMQMVQPSQNHFTNF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2880 497 SUPERFAMILY Leucine zipper domain 194 236 IPR046347 GO:0003700|GO:0006355
Mtr2g2880 497 MobiDBLite consensus disorder prediction 171 196 - -
Mtr2g2880 497 MobiDBLite consensus disorder prediction 90 139 - -
Mtr2g2880 497 SMART brlzneu 190 282 IPR004827 GO:0003700|GO:0006355
Mtr2g2880 497 Coils Coil 213 240 - -
Mtr2g2880 497 ProSiteProfiles DOG1 domain profile. 258 466 IPR025422 GO:0006351|GO:0043565
Mtr2g2880 497 Gene3D - 193 242 - -
Mtr2g2880 497 PANTHER TRANSCRIPTION FACTOR TGA9 66 476 - -
Mtr2g2880 497 MobiDBLite consensus disorder prediction 181 196 - -
Mtr2g2880 497 CDD bZIP_HBP1b-like 194 244 - -
Mtr2g2880 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 236 IPR004827 GO:0003700|GO:0006355
Mtr2g2880 497 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
Mtr2g2880 497 Pfam Seed dormancy control 276 349 IPR025422 GO:0006351|GO:0043565
Mtr2g2880 497 PANTHER TRANSCRIPTION FACTOR TGA9 66 476 - -
Mtr2g2880 497 Pfam bZIP transcription factor 193 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2880 Mtr-Chr2 42419897 42426707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2880 142 497 bZIP Transcription Factor Family AT1G08320 66.292 3.55e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr2g2880 DOG1 9.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2880 K14431 - gmx:100775461 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2880 2 42419897 42426707 Mtr2g2880 2 42419897 42426707 ECH