Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2879 ATGGCTCTACAAAAATTTGAACAAGAGGATCAAAACTCAGCACTCTCACTCACCCTGGATGATTTCCAATGCAATAATGATAAGAACTTTAGCTCCCTCAACATGGATGAGTTCCTAGCTAGCATTTGGAGTTCCAATGATGAAGATACTGCTCAAACTCACAACAATACTGAAAGTGTTGCAACAGCAGAACACACCATTTCCCAACAGCTTGGTAATTCATCATCTGTCCCTCCTCCAATTTGCAAGAAAACTTCGGATGAAGTTTGGTCCGAGATACATAAAAACCAACCACAATTCAAAGAAGCAAATAACCTTAAAAGAAATGAGACACTCAAGAAGCAAGAAACACCTGGAGAAATGACTTTTGAGGATTTCTTGGTAAAAGCTGGAGTAGTAAAACAATCATCATCGTTGTCGTTTCAGAATCATAGTGGCAATGTTTCAAATAACATGGAACCACTGAATATTGCAAGTTCTGGTTTGAGGCCTTCAATGGAAGTAGGATTTCCTACTCAATGTGTGACTAGCAATAGTTCTGCAACATACCAAATGACAAGTGGAGCTGAGTCAAGTGGCGCTGCTAACAGAAAGAGGATAATTGATGGTCCTCCTGAAGTTCTATTGGACCGAAAACAACGCAGAATGATGAAAAATCGAGAATCGGCTGCACGTTCTCGAGCAAGAAAACAGGCTTATACAATAGAGCTAGAGGCTGAGCTGAATCTGCTGCAAGAAGAGAATAAACAGCTGAAACAATTTCTGGCTGAAGCTGAGCGCAAGAGGAAACAAGAGCTTCTGCAAAGAAAGCAATCTGCAAAGGTTCAAAAGGGGACAGAAAAATCAAGCTCAAGCACAACCTGGTGA 867 0.4083 MALQKFEQEDQNSALSLTLDDFQCNNDKNFSSLNMDEFLASIWSSNDEDTAQTHNNTESVATAEHTISQQLGNSSSVPPPICKKTSDEVWSEIHKNQPQFKEANNLKRNETLKKQETPGEMTFEDFLVKAGVVKQSSSLSFQNHSGNVSNNMEPLNIASSGLRPSMEVGFPTQCVTSNSSATYQMTSGAESSGAANRKRIIDGPPEVLLDRKQRRMMKNRESAARSRARKQAYTIELEAELNLLQEENKQLKQFLAEAERKRKQELLQRKQSAKVQKGTEKSSSSTTW* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2879 288 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 214 229 IPR004827 GO:0003700|GO:0006355
Mtr2g2879 288 SMART brlzneu 207 271 IPR004827 GO:0003700|GO:0006355
Mtr2g2879 288 Coils Coil 230 276 - -
Mtr2g2879 288 Pfam bZIP transcription factor 211 263 IPR004827 GO:0003700|GO:0006355
Mtr2g2879 288 SUPERFAMILY Leucine zipper domain 211 259 IPR046347 GO:0003700|GO:0006355
Mtr2g2879 288 MobiDBLite consensus disorder prediction 262 276 - -
Mtr2g2879 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 209 261 IPR004827 GO:0003700|GO:0006355
Mtr2g2879 288 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 9 187 IPR043452 GO:0003700|GO:0045893
Mtr2g2879 288 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 182 278 IPR043452 GO:0003700|GO:0045893
Mtr2g2879 288 MobiDBLite consensus disorder prediction 262 288 - -
Mtr2g2879 288 CDD bZIP_plant_BZIP46 211 274 - -
Mtr2g2879 288 Gene3D - 210 262 - -
Mtr2g2879 288 PANTHER BZIP TRANSCRIPTION FACTOR 182 278 - -
Mtr2g2879 288 PANTHER BZIP TRANSCRIPTION FACTOR 9 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2879 Mtr-Chr2 42408278 42410594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2879 11 281 bZIP Transcription Factor Family AT3G44460 43.151 3.55e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr2g2879 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2879 K14432 - gmx:100820370 264.618