Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2876 ATGGCTCTACAACAATTAGATCAAGAGGTTCCATTGCAAGAACAAGAAGCTACATTTTCTCAACCAAGCAAGCAAACCTCAATACTCTCACTTACCCTAGATGAGTTCCAATGCAAGAGTGGAAAGAGCTTTAGTTCCCTCAACATGGATGAATTCCTTGCCAGCATTTGGAGTTCCAATGATGAAGCTACCACTCATACTCATAATACTAAAAATGTTGTAACAACACAACACACCATTTCCCAACAATTTGGTAATTCATTCTCTGTCCCTCCTCCAATTTGCAAAAAAACTGTGGATGAAGTTTGGTCTGAGATTCATAAAAACCAACAACAGTTCAAAGAAACAAATAACCTTAAAAGAAGTGAGACACTCAAAAAGCAACAAACACTTGGAGAAATGAGTTTGGAGGATTTCTTAGTAAAAGCTGGTGTAGTACAACAATCATCAGCATTGCCATTTAAGAATCATAATGGCAATGTTTCAAGTAATATGAGACCATTGAATATTGCAAGTTGTTATGGTTTGAGGCCGTCAATGGGAATGGGATTTTCTACTCAATGTGTTTCTAGAAATGGTCTTGCAACATACCAAATGTTGTCACACAATAACAACTTAGGAGTGAAGGATTTTGCTGTGGAGAAATGTCAAAGCTTGACTGAATCAAGTGGGTGTAGTAATAGGAAGAGGATAGTTGAGGGTCCTCCTGAAGTTGTAGTGGAGCGAAGGCAACGTAGAATGTTGAAAAATCGTGAATCGGCTGCTCGTTCTCGAGCAAGAAGACAGGCATATACGGTAGAGCTAGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAATGAAAAGCTAAAACAAGTTCTGGCTGAAGCTGAGAGCAAGAGGAAACAAGAGCTTTTGCAACGAAAACATTCAACAAAGGCTCAAAAGGGCGCAGAAAAATTAAGAGCTATGAGAAGGCCTATAAGCACAACCTGGTGA 975 0.3928 MALQQLDQEVPLQEQEATFSQPSKQTSILSLTLDEFQCKSGKSFSSLNMDEFLASIWSSNDEATTHTHNTKNVVTTQHTISQQFGNSFSVPPPICKKTVDEVWSEIHKNQQQFKETNNLKRSETLKKQQTLGEMSLEDFLVKAGVVQQSSALPFKNHNGNVSSNMRPLNIASCYGLRPSMGMGFSTQCVSRNGLATYQMLSHNNNLGVKDFAVEKCQSLTESSGCSNRKRIVEGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQVLAEAESKRKQELLQRKHSTKAQKGAEKLRAMRRPISTTW* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2876 324 MobiDBLite consensus disorder prediction 293 315 - -
Mtr2g2876 324 Gene3D - 240 300 - -
Mtr2g2876 324 Coils Coil 261 299 - -
Mtr2g2876 324 MobiDBLite consensus disorder prediction 293 324 - -
Mtr2g2876 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 240 292 IPR004827 GO:0003700|GO:0006355
Mtr2g2876 324 PANTHER BZIP TRANSCRIPTION FACTOR 2 324 - -
Mtr2g2876 324 SMART brlzneu 238 299 IPR004827 GO:0003700|GO:0006355
Mtr2g2876 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 245 260 IPR004827 GO:0003700|GO:0006355
Mtr2g2876 324 Pfam bZIP transcription factor 242 295 IPR004827 GO:0003700|GO:0006355
Mtr2g2876 324 SUPERFAMILY Leucine zipper domain 242 290 IPR046347 GO:0003700|GO:0006355
Mtr2g2876 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 324 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2876 Mtr-Chr2 42392486 42395298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2876 7 324 bZIP Transcription Factor Family AT3G44460 44.444 9.79e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr2g2876 bZIP_1 3.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2876 K14432 - gmx:100799576 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2876 2 42392486 42395298 Mtr2g2876 2 42392486 42395298 ECH