Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2870 ATGAAAGAAAAAATGGCGGAAGAACACAGATTGCTACCACCGCAATTATGTGTCAATAATTGCGGTTTCTTTGGAAGCAACACAACGGAGAATCTTTGTTCAAGATGCTACCGCGATTTACAACTCAAAGAACAACAAGCTTCATCAACCAAATTCGTTCTCAATCAATCCATTGCAGCGTCTTCTCCGGCGGTGGTTGTTTTTGAACCGTCATCTTCGCTGCCGGATCCGGTTGGACCGGCGAACGTTGTGGTTGTGGAGAAACCGTTGCAACATAATCGGTGTATGACGTGTAAGAAGCGCGTGGGCCTGACGGGGTTTAAGTGCAAGTGTGGGAGGATGTTATGTGGGATCCATCGTTACCCGGAGCAGCATGCGTGTGAGTTTGATTTTAAGGGGTTGGGGAAAGAGCAGATTGAGAAGGCGAATCCGGTGGTGAAAGGGGAAAAGTTGGAGAAGATCTGA 465 0.4753 MKEKMAEEHRLLPPQLCVNNCGFFGSNTTENLCSRCYRDLQLKEQQASSTKFVLNQSIAASSPAVVVFEPSSSLPDPVGPANVVVVEKPLQHNRCMTCKKRVGLTGFKCKCGRMLCGIHRYPEQHACEFDFKGLGKEQIEKANPVVKGEKLEKI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2870 154 Pfam AN1-like Zinc finger 95 131 IPR000058 GO:0008270
Mtr2g2870 154 Gene3D - 3 64 - -
Mtr2g2870 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 16 62 - -
Mtr2g2870 154 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 5 154 - -
Mtr2g2870 154 Gene3D - 71 150 IPR035896 -
Mtr2g2870 154 SUPERFAMILY AN1-like Zinc finger 85 149 IPR035896 -
Mtr2g2870 154 SMART A20_3 14 38 IPR002653 GO:0003677|GO:0008270
Mtr2g2870 154 ProSiteProfiles Zinc finger AN1-type profile. 89 135 IPR000058 GO:0008270
Mtr2g2870 154 Pfam A20-like zinc finger 15 38 IPR002653 GO:0003677|GO:0008270
Mtr2g2870 154 ProSiteProfiles Zinc finger A20-type profile. 11 45 IPR002653 GO:0003677|GO:0008270
Mtr2g2870 154 SMART AN1_Zf_4 95 132 IPR000058 GO:0008270
Mtr2g2870 154 PANTHER AN1-TYPE ZINC FINGER PROTEIN 5 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2870 Mtr-Chr2 42333156 42334044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2870 5 154 C2H2 Transcription Factor Family AT3G52800 46.471 9.66e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2870 - - gmx:106795660 222.246