Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2859 ATGAAGATTATCGTTGCTTACTTATTGGCCGTTTTGGGAGGCAACCAATCCCCTTCTGCTGCTGATCTTAAACAAATTCTTGGATCAGTTGGAGTTGAAGCTGAGGATTGCAACATTGAGTTGCTCCTAAGTGAAGTCAAGGGCAAGGACTTTGCTGAGCTTATTGCCAGTGGAAGAGAAAAGTTGGCTTCAGTTCCATCAGGTGGTGGTGCTGTTGCTGTTTCTGCTGCAACTGGAGGAGGTGCTGCTGCTGCTGCACCTGCTGCCGAAGCAAAGGAAGAGAAGAAGGTGGAAGAGAAGGAAGAATCCGATGATGATATGGGATTCAGCTTATTCGATTAA 342 0.4649 MKIIVAYLLAVLGGNQSPSAADLKQILGSVGVEAEDCNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVSAATGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2859 113 Gene3D - 1 59 IPR038716 -
Mtr2g2859 113 MobiDBLite consensus disorder prediction 89 103 - -
Mtr2g2859 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mtr2g2859 113 Pfam 60s Acidic ribosomal protein 17 112 - -
Mtr2g2859 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mtr2g2859 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 113 - -
Mtr2g2859 113 MobiDBLite consensus disorder prediction 84 113 - -
Mtr2g2859 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2859 Mtr-Chr2 42212834 42220991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2859 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 75.714 6.19e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2859 K02943 - aof:109825870 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2859 2 42212834 42220991 Mtr2g2859 2 42212834 42220991 ECH