Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2855 ATGAACTTGGAGAATGAATCTACGAATCATTATTTGTCTTCACAATCCAATAACCAAAATTCTCCATCAAAACCAAACTCACACAAGAAAAAAACAAAAAGAGGAAGAAAGAAATTCAAGGAGACAAGGCACCCAATTTACAAAGGAGTTCGCCAAAGAAATAATGGAAACAAATGGGTTTGTGAAATTCTTGAACCAAACAAGAAGAAATCAAGAATATGGCTAGGAACTTACCCTACACCAGAAATGGCAGCTATAGCACATGATGTAGCTGTTCTAGCACTTCATGGTACTTCAGCAATGTTCAATTTCCCTGATTCAGTTTCTCTTCTTCCGGTTTCGAAATCAACTTCACCTGAAGATATAAGAGAAACTGCAACGGAATTTGCAAACACCGCAAGCTCTTCTTCTTTTGTTAACAATTTGAGTGTTGTGACTAAGCCTTGCTTATCTAAAGCAATGTTTTTTGATGAGGAGGTTTTGTTTAATATGCCAGGTTTTTTGAATAGCATGGCTGAGGGTTTGCTTATTACACCACCTTCCATGAAGAGTGCATTGGATTGGGATAATGTTGATTGTGAAATGGATTTAACACTATGGACAGAATAA 609 0.3662 MNLENESTNHYLSSQSNNQNSPSKPNSHKKKTKRGRKKFKETRHPIYKGVRQRNNGNKWVCEILEPNKKKSRIWLGTYPTPEMAAIAHDVAVLALHGTSAMFNFPDSVSLLPVSKSTSPEDIRETATEFANTASSSSFVNNLSVVTKPCLSKAMFFDEEVLFNMPGFLNSMAEGLLITPPSMKSALDWDNVDCEMDLTLWTE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2855 202 MobiDBLite consensus disorder prediction 26 42 - -
Mtr2g2855 202 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 201 IPR045277 GO:0003700
Mtr2g2855 202 SUPERFAMILY DNA-binding domain 46 107 IPR016177 GO:0003677
Mtr2g2855 202 MobiDBLite consensus disorder prediction 1 25 - -
Mtr2g2855 202 Pfam AP2 domain 45 97 IPR001471 GO:0003700|GO:0006355
Mtr2g2855 202 Gene3D AP2/ERF domain 46 106 IPR036955 GO:0003700|GO:0006355
Mtr2g2855 202 MobiDBLite consensus disorder prediction 1 42 - -
Mtr2g2855 202 ProSiteProfiles AP2/ERF domain profile. 46 105 IPR001471 GO:0003700|GO:0006355
Mtr2g2855 202 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 2 201 - -
Mtr2g2855 202 CDD AP2 45 107 IPR001471 GO:0003700|GO:0006355
Mtr2g2855 202 SMART rav1_2 46 111 IPR001471 GO:0003700|GO:0006355
Mtr2g2855 202 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Mtr2g2855 202 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2855 Mtr-Chr2 42165815 42166498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2855 8 201 AP2-EREBP Transcription Factor Family AT5G51990 42.180 1.45e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g2855 AP2 5.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2855 - - gmx:100816109 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2855 2 42165815 42166498 Mtr2g2855 2 42165815 42166498 ECH