Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2845 ATGGAGTTCTGGGGTGCTGAGGTTAAGGTTGGAGAAACTATCAAGATTGACCCATATGACCTTGAAGCAGCTGCAATTCACATTTCTCAGGTTGCACTTGGTGAAGCAAAGAAAGACAAACCAAACGAGTCTGTGGTTATTTACCTCAAAGTTGGTGAACAGAAACTTGTTTTGGGAACCCTGACCAAGGACAAAATTCCTCAGATATCTCTTGATATTGTTCTTGAAAAGGAATTTGAGCTATCTCACAATTCCAAAGCTGCTAGTGTTCATTTCTGTGGATACAAAGCTTACTATGAAGACAATGATGATAGTGAGGAAGAAGGTGAAACTGATAGTGAAGATGAAGACATCCCATTGATTACCACAGAGCAGAATGGAAAACCAGAACCAAAAGCAGAGGAGTTGAAGGTTTCTGAACCTAAAAAAGCTGATGCCAAGAATGCTGCACCTGCCAAGAATGCTGCAACTGCAAAACACGTGAAGGTTGTTGATCCAAAAGATGAAGATTCTGATGATGATGATGAATCTGATGATGAAATTGGAAGCTCTGATGATGAGATGGAGAATGCTGATAGTGATAGTGAAGATGAAGATGACAGTGATGAGGATGATGAGGAAGAGACTCCTGTGAAGAAGGTTGACCAGGGAAAGAAGAGGCCCAATGAATCTGCTTCAAAAACTCCAATTTCTAGCAAGAAATCAAAAAATGCCACTCCTGAGAAGACTGATGGTAAGAAAGCTGGACATACAGCAACTCCTCATCCTAAGAAAGGTGGAAAGACTCCTAACAGTGATGCCAAAACTCCCAAGTCTGGAGGAGGACTCTCTTGCAGTAGTTGCAGCAAGACATTCAACTCTGAAACTGGACTGACACAACATAGCAAGGCCAAGCATGGTGCTAAGTGA 909 0.4191 MEFWGAEVKVGETIKIDPYDLEAAAIHISQVALGEAKKDKPNESVVIYLKVGEQKLVLGTLTKDKIPQISLDIVLEKEFELSHNSKAASVHFCGYKAYYEDNDDSEEEGETDSEDEDIPLITTEQNGKPEPKAEELKVSEPKKADAKNAAPAKNAATAKHVKVVDPKDEDSDDDDESDDEIGSSDDEMENADSDSEDEDDSDEDDEEETPVKKVDQGKKRPNESASKTPISSKKSKNATPEKTDGKKAGHTATPHPKKGGKTPNSDAKTPKSGGGLSCSSCSKTFNSETGLTQHSKAKHGAK* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2845 302 ProSiteProfiles Zinc finger C2H2 type domain profile. 276 302 IPR013087 -
Mtr2g2845 302 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 298 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 102 119 - -
Mtr2g2845 302 Gene3D Nucleoplasmin core domain 1 104 - -
Mtr2g2845 302 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Mtr2g2845 302 ProSitePatterns Zinc finger C2H2 type domain signature. 278 299 IPR013087 -
Mtr2g2845 302 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 298 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 168 209 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 128 147 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 265 294 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 237 251 - -
Mtr2g2845 302 MobiDBLite consensus disorder prediction 102 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2845 Mtr-Chr2 42067539 42070796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2845 1 301 C2H2 Transcription Factor Family AT5G03740 38.110 2.27e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g2845 NPL 4e-13 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2845 - - gmx:100792094 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2845 2 42067539 42070796 Mtr2g2845 2 42067539 42070796 ECH
Mtr2g2845 2 42067539 42070796 Mtr4g1612 4 28243763 28247530 PCT