Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr2g2841 | ATGGAGGAGGATGATAAGAACAAGGCAGAAACTTCTTCCAAGAAAAGAAAAGGGCACCCTCCTGGTTCCGGTGGGGGAACATTCACCCCTCATATAATGAATTTGAATGCTGGTCAGGATTTGGTGGACGCTATATACAATCTATCTGAAGCATTACCTCGTCGATCTGTTATCATAAATTCGGCAACAGGTTCTGTATCAGAGGTTGGCCTTTTTGATCCAAATGGTCCTCCTAACAAGCGCCAGGTAAAATTTCAGATAATTACTTTAGCTGTAATCTGTCTCGTTGATGATGATGGTCGTCATTGTCGTGCAAAGGCAAGATGTGGAGTTATATTGACCGATAATAAGGGAATTACTTTCGGAAGTACTGTTGTGAATTCCCTCAAAGCAGCCGGACCTGTTAAGATTATTGCGTCCAGTTTTGCAACAGATGTTGCTAAGGAATCAACTGCAAGAATTTTGGCTGCTGCTGCGGCTCGAAATAGTAATTCTGATTCACAGAAGGTTCTTGAAGAGTTAGAAGGACACTCGAGTCGCCTTTCACCAACAACTAGTACGGCAAATAATCAGGACATGAAGTCTCCTTCTGTAGAAGACATTTGA | 606 | 0.4241 | MEEDDKNKAETSSKKRKGHPPGSGGGTFTPHIMNLNAGQDLVDAIYNLSEALPRRSVIINSATGSVSEVGLFDPNGPPNKRQVKFQIITLAVICLVDDDGRHCRAKARCGVILTDNKGITFGSTVVNSLKAAGPVKIIASSFATDVAKESTARILAAAAARNSNSDSQKVLEELEGHSSRLSPTTSTANNQDMKSPSVEDI* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr2g2841 | 201 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 27 | 147 | - | - | |
| Mtr2g2841 | 201 | MobiDBLite | consensus disorder prediction | 178 | 195 | - | - | |
| Mtr2g2841 | 201 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 | 8 | 191 | - | - | |
| Mtr2g2841 | 201 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Mtr2g2841 | 201 | MobiDBLite | consensus disorder prediction | 161 | 201 | - | - | |
| Mtr2g2841 | 201 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 30 | 143 | IPR005175 | - | |
| Mtr2g2841 | 201 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Mtr2g2841 | 201 | Gene3D | - | 30 | 161 | - | - | |
| Mtr2g2841 | 201 | ProSiteProfiles | PPC domain profile profile. | 25 | 177 | IPR005175 | - | |
| Mtr2g2841 | 201 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 191 | IPR039605 | GO:0003680 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr2g2841 | Mtr-Chr2 | 42007255 | 42008430 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr2g2841 | 12 | 143 | AT-hook Motif Nuclear Localized (AHL) Family | AT2G45850 | 28.667 | 8.76e-13 | 63.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr2g2841 | - | - | mtr:MTR_2g084675 | 384.8 |