Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2811 ATGGACTCATCACTAGACAACACCAATAACTTTGAGCTGCATGACTTCATTGACGATCCAAACTTTGATCAATTTATCGATTTAATTCGAGGTGAGCATGAAGATGCAATATCTAACTTTGGTTCTGACCTTATCAATGATTGCTTCATTGATAATAATATTAACCAACTTCTTTCAATTCCTCCAAATCCATTATTTGATCACAACAACAATATTATTAATAATAATGTTGTTAATGAGTATAATCCAAGCCCTACAACAATTGGCTCCTTCTCTTGTTATGATGGAGTGATTAAAGGAGAAGGAGAAAATGATGGAGGTGGTTCTTCTGCAACAACAACGACAACGACAACCACGATCGATGATGCCAACCCTAGGGCTAAAACTGATAGGTCCAAGACTCTCATTTCTGAGAGAAGGAGGAGAGGCAGGATGAAGGATAAGCTTTATGCATTGCGTTCTTTGGTTCCCAACATTACAAAGATGGATAAGGCTTCTATAATTGGAGATGCAGTATCATATGTGCATGACCTTCAAGCACAAGCTAGGAAGTTAAATGCTGAGGTTTCAGGGCTTGAAACATCTTTATCAGTGTCTGAAAATTATCAAGGATCAATTAGTAACACCATTAATGTTCAAAGCCATCCAATTTGCAAGAAAATTATCCAGGTGGAGATGTTTCAAGTGGAGGAAAGAGGTTATTATGCAAAAATATTGTGCAATAAAGGAGAAGGAGTAGCTGCTTCATTGTACAAGGCTCTTGAGTCTCTTGCAAATTTCAATGTCCAAAACTCAAACTTAGCTACAGTTTGTGACACTTTTCTACTTACATTTACACTGAATGTAAACGGTTCTGAACCAGAAATGAACCTTCAAAATTTGAAGCTATGGGTGGCTGGTGCTCTTTTGAACCAAGGCTTTGAATTCATGCCATCATTTTGA 942 0.3726 MDSSLDNTNNFELHDFIDDPNFDQFIDLIRGEHEDAISNFGSDLINDCFIDNNINQLLSIPPNPLFDHNNNIINNNVVNEYNPSPTTIGSFSCYDGVIKGEGENDGGGSSATTTTTTTTIDDANPRAKTDRSKTLISERRRRGRMKDKLYALRSLVPNITKMDKASIIGDAVSYVHDLQAQARKLNAEVSGLETSLSVSENYQGSISNTINVQSHPICKKIIQVEMFQVEERGYYAKILCNKGEGVAASLYKALESLANFNVQNSNLATVCDTFLLTFTLNVNGSEPEMNLQNLKLWVAGALLNQGFEFMPSF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2811 313 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 8 310 - -
Mtr2g2811 313 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 310 - -
Mtr2g2811 313 MobiDBLite consensus disorder prediction 106 123 - -
Mtr2g2811 313 SMART finulus 135 184 IPR011598 GO:0046983
Mtr2g2811 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 178 IPR011598 GO:0046983
Mtr2g2811 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 202 IPR036638 GO:0046983
Mtr2g2811 313 Coils Coil 175 195 - -
Mtr2g2811 313 MobiDBLite consensus disorder prediction 102 131 - -
Mtr2g2811 313 Gene3D - 121 195 IPR036638 GO:0046983
Mtr2g2811 313 Pfam Helix-loop-helix DNA-binding domain 136 179 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2811 Mtr-Chr2 41578051 41579904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2811 4 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.393 1.17e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g2811 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2811 - - gmx:100805451 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2811 2 41578051 41579904 Mtr2g2811 2 41578051 41579904 ECH
Mtr2g2811 2 41578051 41579904 Mtr4g1658 4 29045593 29047894 PCT