Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2807 ATGGCGGAGATTCACATACCTAGCAAAGATGTCAAGAGTGAAAGTAGTAGCGGAATCAGAGCTAAACATGCCTCTTTGCCGATTCGAAGAAAACGTTCGTTCTTCGATTTAAACGAAGATGCCGTGGATGATGGAGATGATCATGTGATAGTGATAAGTGAAGGTCCTTGTGGTGAAATAAGTAACAATGAGATATCATCACAAGAAGGGAATTTGAGTAGCAATAATAATTCTAGTGAAGAAGGAAAAGGGCGTGGAAGTACGGTTAGACAATATGTGAGGTCGAAAATGCCTAGGCTTCGTTGGACTCCTGATCTTCATTTATCTTTTGTGCATGCTGTTGAGAGGCTTGGAGGGCAAGAAAGAGCAACACCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGAATTGCACATGTGAAGAGTCATTTGCAGATGTACCGGAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTGTCCCAAAAAAATAGAGCAATGCAAGGAAGGCATCACATTATGGATATGTATGGAAGATTCAATGTCCAAGGACACTTTGGTGTTGAAAACAACTATTTGCACCCATCGTCTCCTCTACTGAAACAATCATCATATAATGAAATCAAAGCTCATGACACTTCAAGATTTCATGAGAGTGGGGTTTTCAATAATAATCACGTGATCTTCAGATCAAGTTCAGTGTGGGACAAAGATTTCTCACATCTATTTGATGTAAAGGATGCAATTACAAGAAATAATATTGCAGCTATTAGGTCTAGCCAAGTAAGTCAATTACTACCCGAATCAAAAAGCTTATCTCGAGGGGATGATAATGGTGCTAAACATTTTCCATGGAGCACGTATTCTACTTCTATCAATTATCAACGTAGCTCTGAGTACACAATGTTTGGTTCTGAGGTACACGATAAAATAGATAGAATGGAAGAATCCATACATCAAACTCAAGTATCAAAGCAAAGTCATCTCACAACCCAGTTAAAAAGGATGAATGAGAAGAAAGAGTCATCAAATTTCCTAAAACTAAAGTTAAGTCGAGATTCAGAAAGTGATCAAGAAACCAATACGATACTTTCTCTTTCATTATTCTCTTCATCCTCCAATTCAAAGTGA 1134 0.3827 MAEIHIPSKDVKSESSSGIRAKHASLPIRRKRSFFDLNEDAVDDGDDHVIVISEGPCGEISNNEISSQEGNLSSNNNSSEEGKGRGSTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLRIAHVKSHLQMYRSKKLDESGQVLSQKNRAMQGRHHIMDMYGRFNVQGHFGVENNYLHPSSPLLKQSSYNEIKAHDTSRFHESGVFNNNHVIFRSSSVWDKDFSHLFDVKDAITRNNIAAIRSSQVSQLLPESKSLSRGDDNGAKHFPWSTYSTSINYQRSSEYTMFGSEVHDKIDRMEESIHQTQVSKQSHLTTQLKRMNEKKESSNFLKLKLSRDSESDQETNTILSLSLFSSSSNSK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2807 377 SUPERFAMILY Homeodomain-like 96 152 IPR009057 -
Mtr2g2807 377 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 61 376 IPR044848 GO:0003700
Mtr2g2807 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 154 IPR017930 -
Mtr2g2807 377 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 153 IPR006447 GO:0003677
Mtr2g2807 377 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 61 376 - -
Mtr2g2807 377 MobiDBLite consensus disorder prediction 60 89 - -
Mtr2g2807 377 Gene3D - 97 154 - -
Mtr2g2807 377 MobiDBLite consensus disorder prediction 1 22 - -
Mtr2g2807 377 MobiDBLite consensus disorder prediction 60 85 - -
Mtr2g2807 377 Pfam Myb-like DNA-binding domain 100 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2807 Mtr-Chr2 41503564 41508834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2807 89 177 G2-like Transcription Factor Family AT2G42660 65.957 4.25e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr2g2807 Myb_DNA-binding 6.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2807 - - mtr:MTR_2g084230 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2807 2 41503564 41508834 Mtr2g2807 2 41503564 41508834 ECH