Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2788 ATGCTCCTGCCACTGTTTCGACCACAGAGTCGTTTGACATCTTCCGATTTGATCCATTTGGGTCAGGGAGATATAGGTTCTTCCAGTGATTCCAATAGCATCCAAAGCTATAGATATGATGTGTTTATCAGTTTCCGTGGTGCTGACACCCGCAGCACTTTTGTTGATCATCTTCATGCTCATCTAACAACTAAGGGTATTTTCGCTTTCAAGGATGACAAAAGACTTGAAAAAGGAGAATCCCTTTCGCCGCAACTTCTACAAGCAATTCAAAGTTCTCGGATTTCTATTGTTGTCTTCTCTAAAAATTATGCGGAGTCAACATTATGTTTGGAAGAGATGGCCACTATTGCTGAATATCATACAGAATTGAAACAGACTGTTTTCCCTATTTTTTATGATGCCGATCCATCTCATGTACGAAAACAGAGCGGGGTGTACCAGAATGCCTTTGTTCTACTCCAGAATAAATTCAAACATGACCCAAATAAGGTTATGAGATGGGTGGGAGCTATGGAAAGTTTGGCTAAATTAGTCGGTTGGGATGTTAGGAACAAGCCAGAGTTTCGAGAGATTAAGAATATTGTTCAGGAGGTAATAAATACAATGGGTCATAAATTCTTGGGGTTTGCTGATGACCTTATTGGGATACAACCTCGAGTAGAAGAATTAGAAAGCCTTTTGAAATTAGACTCAAAGGATTATGAATTTCGAGCTATAGGCATTTGGGGGATGGCTGGAATCAGAAAGACAACTCTTGCTTCTGTCTTATACGATAGAGTCTCTTATCAGTTTGATGCAAGTTGTTTTATTGAGAATGTAAGCAAAATTTATAAAGATGGCGGTGCTACTGCTGTACAGAAACAAATCCTTCGGCAAACCATAGATGAAAAAAACCTAGAGACATACAGCCCTTCTGAAATATCTGGAATTATACGTAAAAGACTTTGCAACAAAAAGTTTCTTGTAGTCCTTGACAATGCTGATCTATTAGAGCAAATGGAAGAATTGGCTATAAATCCTGAATTGCTTGGTAAAGGAAGTAGAATAATCATTACAACCAGGGATATGCATATTCTGAGTGTTTGGAGCTCAGTTGATGTGTATGAGGTTCCACTATTGAATAGCAATGATGCCCGCAAACTTTTCTATAGAAAAGCTTTCAAAAGTGAGGATCCCACTAGCGGATGTGTAAAGCTGACTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCATTAGCTGTTCGAGTAGTGGGGTCTTTCTTGTGCACTCGAGATGCTAACCAATGGAGAGATGCTTTGTATAGATTGAGGAATAATCCAGACAACAATGTGATGGATGTGCTTCAGGTAAGTTTTGAGGGATTACATTCAGAGGACCGAGAAATATTTCTGCATATTGCTTGTTTCTTTAAAGGGGAGAAGGAAGATTATGTGAAGCGAATTCTAGATGCTTGTGGGTTGCACCCTCATATTGGAATTCAAAGTTTGATTGAGAGGTCATTCATAACTATTAGAAATAATGAAATTCTTATGCATGAAATGTTGCAAGAATTAGGGAAGAAAATTGTTCGGCAACAGTTTCCTTTCCAACCAGGATCGTGGAGTAGATTGTGGCTTTATGATGATTTCTACTCTGTCATGATGACAGAAACGGGAACAAACAATATTAATGCCATAATTCTAGATCAAAAAGAGCATATCTCTGAATATCCTCAGTTGAGGGCTGAAGCATTGTCAATAATGAGGGGACTTAAAATTCTTATATTATTATTTCATAAGAATTTTTCAGGAAGTCTCACTTTTCTTTCTAACAGCTTGCAGTATCTTCTGTGGTATGGTTACCCTTTTGCTTCTTTGCCATTAAATTTTGAGCCGTTTTGTCTTGTTGAATTGAATATGCCTTATAGCAGTATTCAACGACTATGGGACGGTCACAAGGTATTTTAA 1950 0.381 MLLPLFRPQSRLTSSDLIHLGQGDIGSSSDSNSIQSYRYDVFISFRGADTRSTFVDHLHAHLTTKGIFAFKDDKRLEKGESLSPQLLQAIQSSRISIVVFSKNYAESTLCLEEMATIAEYHTELKQTVFPIFYDADPSHVRKQSGVYQNAFVLLQNKFKHDPNKVMRWVGAMESLAKLVGWDVRNKPEFREIKNIVQEVINTMGHKFLGFADDLIGIQPRVEELESLLKLDSKDYEFRAIGIWGMAGIRKTTLASVLYDRVSYQFDASCFIENVSKIYKDGGATAVQKQILRQTIDEKNLETYSPSEISGIIRKRLCNKKFLVVLDNADLLEQMEELAINPELLGKGSRIIITTRDMHILSVWSSVDVYEVPLLNSNDARKLFYRKAFKSEDPTSGCVKLTPEVLKYAQGLPLAVRVVGSFLCTRDANQWRDALYRLRNNPDNNVMDVLQVSFEGLHSEDREIFLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERSFITIRNNEILMHEMLQELGKKIVRQQFPFQPGSWSRLWLYDDFYSVMMTETGTNNINAIILDQKEHISEYPQLRAEALSIMRGLKILILLFHKNFSGSLTFLSNSLQYLLWYGYPFASLPLNFEPFCLVELNMPYSSIQRLWDGHKVF* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2788 649 Pfam TIR domain 39 203 IPR000157 GO:0007165
Mtr2g2788 649 Gene3D - 373 457 IPR042197 -
Mtr2g2788 649 Gene3D - 186 369 IPR027417 -
Mtr2g2788 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 467 IPR027417 -
Mtr2g2788 649 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 181 IPR035897 -
Mtr2g2788 649 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 35 645 - -
Mtr2g2788 649 Gene3D - 9 175 IPR035897 -
Mtr2g2788 649 SUPERFAMILY "Winged helix" DNA-binding domain 444 547 IPR036390 -
Mtr2g2788 649 ProSiteProfiles TIR domain profile. 37 203 IPR000157 GO:0007165
Mtr2g2788 649 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 645 IPR044974 GO:0006952
Mtr2g2788 649 PRINTS Disease resistance protein signature 239 254 - -
Mtr2g2788 649 PRINTS Disease resistance protein signature 315 329 - -
Mtr2g2788 649 PRINTS Disease resistance protein signature 408 422 - -
Mtr2g2788 649 SMART till_3 38 178 IPR000157 GO:0007165
Mtr2g2788 649 Pfam NB-ARC domain 229 441 IPR002182 GO:0043531
Mtr2g2788 649 Pfam Leucine Rich Repeat 628 645 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2788 Mtr-Chr2 41285572 41288831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2788 36 648 WRKY Transcription Factor Family AT4G12020 29.858 5.08e-69 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2788 - - mtr:MTR_2g083830 1259.97