Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2787 ATGGATTCAAACTCCAAATTTTCAGAGATTTTGCTCTCATGGAGGTCCTTGCTCCTGCAACCATTTCGGGCTCTGTTAGGTCGTTTGTCATTTTCCAATTCGGGCCAAGGAGGTACAGCTTTTTCCGGTTCTTCCATTGATTCCAGTGGAGTGCATAGCTATAAATACGACGTGTTTATCAGTTTCAGAGGTCCAGACACCCGCAACACTTTTGTTGATCATCTTTATGCTCATCTAACAAGAAAAGGTATTTTTGCGTTCAAGGATGATAAAAGGCTCGAGAAAGGAGAATGCCTTTCGCTGCAACTTCGACAAGCAATTGCAAATTCACGGATATCTATCGTTGTCTTCTCAGAAAGATATGCTGAGTCAACATGGTGTTTGGAAGAAATGGCTACTATTGTTGAATGTCGTAGCAATTTCTTACAAACTGTTTTCCCTGTTTTTTATGATATCAATCCATCTCATGTACGAAAACAGAACGGTGTGTACCAGAATGCCTTTGTTTCACACATGAAAAAATTGAAACATGATCTGAATAAGGTTGAGAGATGGACGAAAGCTATGGTCTATTTAACTGAAATAGTTGGTTGGGATGTTAGGAACAAGCCAGAGTTTCGAGAGATTCAAGATATTGTTCAGCAGGTAATAAAAACATTGGGTCATAAATTCTCAGGGTTTGCTGATGACCTTATCGGGATACAACCTCGAGTAGAAGAATTAGAAAGTCTTCTGAAATTAAACTCAGACAATGATGACTTTCGTTTTATAGGTATTTGGGGGATGGCTGGAATCGGAAAGACAACTCTTGCTTCCGTCTTGTATGATAGAGTCTCCTATCAGTTTGATGCAATCTGTTTTATTGAGAATGTAAGCAAAATTTATAAAGATGGTGGTGCCACTGCTGTACAGAAACAAATCCTTCGGCAAGCCACAAGTGAAAAAAACCTAGAGACATACAGCCCTTCTGAAATATCTGGAATTGTACGTAAAAGACTTTGCAACAAAAAGTTTCTTGTAGTTCTTGACAATGCTGATCTATTAGAACAAATGGAAGAATTGGCTATAAATCCTGAATTGCTTGGTAAAGGAAGTAGAATGATCATTACAACCAGGGATATGCATATTCTAAGAGTGTTTGGAGCTCAGTTATCAGTATCTCACGATACATGTGTGTCGTACGATGTGTATGAGGTTCCACTATTGAATAGCAATGATGCCCGTAAACTTTTCTATAGAAAAGCTTTCAAAAGTGAGGATCCCACTAGCGGATGTGTAAAGCTCACTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCATTGGCAGTTCGAGTAGTGGGGTCTTTCTTGTGCACTCGAGATGCTAACCAATGGAGAGATGCCTTGTATAGATTGAGGAATAATCCAGACAACAAAGTTATGGACGTGCTTCAGGTAAGTTTGCAGGGATTACATTTAGATGACCAAGAAATATTTCTGCATATTGCCTGTTTCTTTAAAGGAATGAAAGAAGATTATGTGAAGCGAATTCTCGATGCTTGTGGGTTGCATCCTCACATTGGCATTCAAAGTTTGATTGAGAGGTCACTCGTAACTATTAGAAATCAGGAAATTCATATGCATGAAATGTTGCAAGAATTGGGAAAGAAAATAGTTCGACAACAATTTCCTGGCGAACCTGGATTGTGGAGTAGATTGTGGCTTTTTGAGGATTTCTACCCTGTCATGATGACAGAGATGGGAACAAACAATGTTAAAGCCATTATTCTAAATAAAAAAGAGCATATCTCTGAATATCCTCCGCTGAGGGCCGAAGGATTGTCAATAATGAGGGGACTTAAAATTCTTATATTATATCATCAAAAAATTTCAGGAAGTCTCAATTTCATTTCTAACAGCTTGCAGTATCTTCTTTGGTATGGTTACCCTTTTGCTTCTTTGCCATTAAATTTTGAGCCATTTGGTCTTGTTGAATTGAATATGCCTTGTAGCAGCATCCAACGACTATGGGACGGTCACAAGGATCTCCCTTGTTTGAAAAGGGTGGATCTCAGCAACTCCAAATATCTTCTGGAGACTCCCAATTTTGATGGAAGCCGAAGACTTGAACGTCTAGATTTTACAGGATGCATAAACCTATCGTATGTCCATCCGTCCATTGGACTTCTGGAAAAACTTGCTTTCTTGAGTTTGGAAGGCTGCAGCAGTTTGGTCAGGCTAGTTCTTGATGGTGATGATGCATCTAACTTACATTCTCTCAAAGTTCTACACCTCTCTGGCTGCCTAAAACTTGAAACCATGCCAGATTTTACTGGGGTCTCAAATCTTGAGTATCTTGATGTTGATCAATGTTCGAGTTTATCAACGATTGGTCAATCTATTGCGGTTCTTACACAGCTTAAGTTCTTGAGTTTAAGAGACTGCACAAATCTTGTTAGTATTCCCAAAAGCATTAATTGTATGACATCTCTTGTAACTCTAGATTTATGTGGCTGCTTAAGACTAGAGAATCTACCCTTGGGAAATGTATCAGTGTCTGCTGAAAATATGGACTACTTTTCAGTCTCTGGAGAAATTGTTGACCACTCTTACTATCTGGAGTCTTTGATTTTTTTGGACCTAAGCTTTTGCAATTTAAGTACAGTTCCTGATGCTATTGGAGATTTATGGCATTTAGAAAGGCTAAATCTTGAAGGAAACAGCTTTGTTTCCCTACCACCTTCAATGGAGAGGCTTTCCAGTCTAGCATATTTAAACTTGGCACATTGCAGCTGGCTTCAATCTTTGCCTAAGCTCCAATTGTGTGCTACTTCTTCATATGGTGGAAGGTATTTTAAAGTGTTATCTGGATCTCATAATCATAGGTCAGGATTATATATTTTCAACTGTCCCCTCTTGGAGATCGCAGAAGGAGGTCAAAGCTTGGCACTTTCATGGCTAGAGAGATTAGTTGAGAATCCTCATCATTTCCGGTGTGGTTTTGACATTGTTGTTCCTGGGGAGAAAATTCCAGAATGGTTTAATCATCAATTTACGGGAAATTCAATAATAAAGATATCAGACTTTACAAATGAGTTTGACAACTGGCTCGGCTTTGCCTTTTGTGTGGCATTTGTGGAAAACTGTGGTTCAACTACGTCTGGTTTTTCACTTCGTTCATTTTCCTCTCAGCTTACATATCCTCTTTATCTTTCTTTTGAAAGTGAACATATGGAAGAAACTTTCGATATACCGCTTCGGTTTGACCTGAACATAGTTGATGGCTCAAATTCAGAGCATCTCTGGCTAATCTATATCTCTAGACCCCACTGCCATTTTGTAACAACAGGAGCACATATCACATTTAAAGCTTGCCCTTATCTGGAGATAAAAAGATGGGGATTATGCAAGGTACTCGAGCATGATATCTCTATCTCATCCGAGTTGGGGATAGATGATGTTCGACATCAACGCTATCTTCACTTGGATCATGTACATGAAAGTAGCAGCAGCAGCAGTCCTGACCTCCAGCTTCCTTATAACTGGTATGAAACTGAGGTAGAGATAAAACCTAAAATCAAACTTCGTTATAACTGGCATGTTACGGAGGAACAGGAAAATGAGAATAGGGAAGTGAATGTGAAACAAAATCATCTCTCAGATATGGGACTCAACACATACATAGATGATGATTTGCATTAA 3681 0.3901 MDSNSKFSEILLSWRSLLLQPFRALLGRLSFSNSGQGGTAFSGSSIDSSGVHSYKYDVFISFRGPDTRNTFVDHLYAHLTRKGIFAFKDDKRLEKGECLSLQLRQAIANSRISIVVFSERYAESTWCLEEMATIVECRSNFLQTVFPVFYDINPSHVRKQNGVYQNAFVSHMKKLKHDLNKVERWTKAMVYLTEIVGWDVRNKPEFREIQDIVQQVIKTLGHKFSGFADDLIGIQPRVEELESLLKLNSDNDDFRFIGIWGMAGIGKTTLASVLYDRVSYQFDAICFIENVSKIYKDGGATAVQKQILRQATSEKNLETYSPSEISGIVRKRLCNKKFLVVLDNADLLEQMEELAINPELLGKGSRMIITTRDMHILRVFGAQLSVSHDTCVSYDVYEVPLLNSNDARKLFYRKAFKSEDPTSGCVKLTPEVLKYAQGLPLAVRVVGSFLCTRDANQWRDALYRLRNNPDNKVMDVLQVSLQGLHLDDQEIFLHIACFFKGMKEDYVKRILDACGLHPHIGIQSLIERSLVTIRNQEIHMHEMLQELGKKIVRQQFPGEPGLWSRLWLFEDFYPVMMTEMGTNNVKAIILNKKEHISEYPPLRAEGLSIMRGLKILILYHQKISGSLNFISNSLQYLLWYGYPFASLPLNFEPFGLVELNMPCSSIQRLWDGHKDLPCLKRVDLSNSKYLLETPNFDGSRRLERLDFTGCINLSYVHPSIGLLEKLAFLSLEGCSSLVRLVLDGDDASNLHSLKVLHLSGCLKLETMPDFTGVSNLEYLDVDQCSSLSTIGQSIAVLTQLKFLSLRDCTNLVSIPKSINCMTSLVTLDLCGCLRLENLPLGNVSVSAENMDYFSVSGEIVDHSYYLESLIFLDLSFCNLSTVPDAIGDLWHLERLNLEGNSFVSLPPSMERLSSLAYLNLAHCSWLQSLPKLQLCATSSYGGRYFKVLSGSHNHRSGLYIFNCPLLEIAEGGQSLALSWLERLVENPHHFRCGFDIVVPGEKIPEWFNHQFTGNSIIKISDFTNEFDNWLGFAFCVAFVENCGSTTSGFSLRSFSSQLTYPLYLSFESEHMEETFDIPLRFDLNIVDGSNSEHLWLIYISRPHCHFVTTGAHITFKACPYLEIKRWGLCKVLEHDISISSELGIDDVRHQRYLHLDHVHESSSSSSPDLQLPYNWYETEVEIKPKIKLRYNWHVTEEQENENREVNVKQNHLSDMGLNTYIDDDLH* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2787 1226 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 764 IPR044974 GO:0006952
Mtr2g2787 1226 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 767 878 IPR044974 GO:0006952
Mtr2g2787 1226 Pfam NB-ARC domain 247 469 IPR002182 GO:0043531
Mtr2g2787 1226 PRINTS Disease resistance protein signature 256 271 - -
Mtr2g2787 1226 PRINTS Disease resistance protein signature 332 346 - -
Mtr2g2787 1226 PRINTS Disease resistance protein signature 436 450 - -
Mtr2g2787 1226 PRINTS Disease resistance protein signature 748 764 - -
Mtr2g2787 1226 Pfam Leucine Rich Repeat 656 672 IPR011713 -
Mtr2g2787 1226 Gene3D Ribonuclease Inhibitor 573 746 IPR032675 -
Mtr2g2787 1226 Pfam C-JID domain 998 1135 IPR045344 -
Mtr2g2787 1226 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 198 IPR035897 -
Mtr2g2787 1226 SMART till_3 55 195 IPR000157 GO:0007165
Mtr2g2787 1226 Gene3D - 401 485 IPR042197 -
Mtr2g2787 1226 SUPERFAMILY L domain-like 607 967 - -
Mtr2g2787 1226 Gene3D - 228 385 IPR027417 -
Mtr2g2787 1226 Gene3D Ribonuclease Inhibitor 747 847 IPR032675 -
Mtr2g2787 1226 Gene3D Ribonuclease Inhibitor 848 983 IPR032675 -
Mtr2g2787 1226 ProSiteProfiles TIR domain profile. 54 220 IPR000157 GO:0007165
Mtr2g2787 1226 Pfam TIR domain 55 223 IPR000157 GO:0007165
Mtr2g2787 1226 Gene3D - 52 226 IPR035897 -
Mtr2g2787 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 495 IPR027417 -
Mtr2g2787 1226 SUPERFAMILY "Winged helix" DNA-binding domain 471 574 IPR036390 -
Mtr2g2787 1226 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 767 878 - -
Mtr2g2787 1226 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 48 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2787 Mtr-Chr2 41277939 41284357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2787 748 930 WRKY Transcription Factor Family AT4G12020 32.979 9.42e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2787 - - mtr:MTR_2g083520 1790.78