Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2774 ATGCAACGAGCAAGTGACCTTCCTGCAGTCTCAATATTTATTGCGAATAAAATCATTGATCGTGCACGTTCAGCTATGAACGAACTGTGCAAAATAGGAATTGCAGAAAACAATGTATGGCATCAACATAGGGAACATAGGTACGAAATTCTCGATGATTTTGAATATTTGAAACAATTTGGCTGTGTTGATGCAACATTATTGGAGATTGTTAAGTTGGTTGAAGTTGGAGAGCTTCAAACTTTACCTAGTTTTGATTTGTGTCGAAACCAAAATTCAATGTATACAATGGAAGTTTTTGAACAAGGTTTGCAGATTGAAGCTTCTCGGGACAAGGCATTGATTAAGATAAGTCCAACTAAACTAGTTGAATTACTTATGGATGTGAATCAATGGTCGACGGCATTTTACAACATTGTCTCAGGAGCAAGGATTCTAGGAAGCATAGAAGGAAGCTATGATGAAAAAATGCATGTGATGAGTGCAGAATTTCATTTACCAAGTCCTGTTATACCAACTCGGAAGTGTGTTTTTGCAAGATATAGCAAACAATTCACTCATAACATATGGGCTGTTGTTGATGTATCTTTGGAGGACATTTTACAATCTCCTTCTAACAATTTTCATAAAAGACCTTCTGGCTGTTTGATTGAAGGAATGCCCGATGGAAACTCCAAGGTTATATGGTTGGAGCACGTGGAAGCAGACTATAGTAAATTGAGTGATCTTTTTAGGCCATTAGTTACCTCAGCTTTGGCTTTTGGTGCAACACGTTGGCTAACTTCCATTGTCCGATACATTGAGTGGTCTGAAACACTGAAGGCTCCAAAACTTATTGCAGATGCTGGAGTTCTTATACCACAAATTGGGAGGACAAGTTTCTTGAAATTGGCCGATAGAATGATGAGAAGATTCTGTGCCAATCTTGGTTCCACCACTAAGAATCCATGGATTCGACTAGCTCCTCTTCCTGCTGGTTCAGCAGATATTAGAGTTATGATTGCAAATGATATGGCTGGTAGTACAAATGAGCCTATTGGAACATCACTGTTTTTTTGTACTACTCTTTGGCTTAATGTCTCCCCAAATCGATTATTCAACTTCCTTCGGCATGAGAAATCCAGAAGCAAGTGGGATAAACATTCACAAAACCTTTCTATTCGAGAATTCGCATGCATTCTCACCGGCAAACATCCAGAGAATCGTGTTTCTTTGCTTAGAGCAAGGGACAAGAATGAAATATTTTACCTACAAGAGAGTTACAAAGATACAACAGCTTCCTACGTGATTTATTGTCCTTTAGACGAGCAAAAGTTGACACATCTTGCAACTGGATCGAACCCAGACGATGTAGTTGCTTTTCCATCAGGGTTTGCTATTATCCCAGGAGGGTTACCAAGAGATGGTGATAAAGGAAAAGGAAATGCCAACAGTACTGCTAACGATGAAAGTCTTCTAACTATCTCATTTCATATCATTGGTAAAGCCAACAATGCTGCATCAATCCCTCCGGAATCAGTTCAAACCATCTATAACATGGTTACAGAAACAATGGCTGCTATAAAAGATGCAGTGTCGTATCATAGTCGACTCAACAACTGGGATCAAGATGAAGTGGCAAATAGCTTGGCAGCATAG 1638 0.3919 MQRASDLPAVSIFIANKIIDRARSAMNELCKIGIAENNVWHQHREHRYEILDDFEYLKQFGCVDATLLEIVKLVEVGELQTLPSFDLCRNQNSMYTMEVFEQGLQIEASRDKALIKISPTKLVELLMDVNQWSTAFYNIVSGARILGSIEGSYDEKMHVMSAEFHLPSPVIPTRKCVFARYSKQFTHNIWAVVDVSLEDILQSPSNNFHKRPSGCLIEGMPDGNSKVIWLEHVEADYSKLSDLFRPLVTSALAFGATRWLTSIVRYIEWSETLKAPKLIADAGVLIPQIGRTSFLKLADRMMRRFCANLGSTTKNPWIRLAPLPAGSADIRVMIANDMAGSTNEPIGTSLFFCTTLWLNVSPNRLFNFLRHEKSRSKWDKHSQNLSIREFACILTGKHPENRVSLLRARDKNEIFYLQESYKDTTASYVIYCPLDEQKLTHLATGSNPDDVVAFPSGFAIIPGGLPRDGDKGKGNANSTANDESLLTISFHIIGKANNAASIPPESVQTIYNMVTETMAAIKDAVSYHSRLNNWDQDEVANSLAA* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2774 545 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 529 IPR042160 -
Mtr2g2774 545 SUPERFAMILY Bet v1-like 87 268 - -
Mtr2g2774 545 SUPERFAMILY Bet v1-like 289 469 - -
Mtr2g2774 545 SMART START_1 63 270 IPR002913 GO:0008289
Mtr2g2774 545 ProSiteProfiles START domain profile. 18 272 IPR002913 GO:0008289
Mtr2g2774 545 Gene3D - 82 271 IPR023393 -
Mtr2g2774 545 Pfam START domain 90 261 IPR002913 GO:0008289
Mtr2g2774 545 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 2 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2774 Mtr-Chr2 41089567 41092856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2774 65 526 Homeobox Transcription Factor Family AT4G04890 38.525 1.61e-100 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2774 K09338 - jre:108992281 450.669