Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2726 ATGGCTGATGATGATCAATTTCATCATTCAAGTGGAAACTGGTGGGACACAGCATCAAGAAATATGAGATTTAATCAAAGTGGAGGAACATCACAATCTTCTTCATCTACCATAACCAACAACATAGTTGATTTTGCTTGGCAAAATTCAGATATGGTGGAAATAAAACCAAGATCTTCCATGGAAAATTCTTCTGTTGTTTTTCATGATAATCAGAAACTTCAACAACCTCAAGATTCTTCTACTTCATCTGACCCTAACTTGCATATGATGGGTTTAGGTCTTTCTTCTCATACCTTGGATTGGAATCAACCATCTTTGATAGGTGAGAAGGGAACAGAGAACAGTTTCAGGTCAATATTGGAAGAAAATTTGAGTTCAACAAGGAACAATTTTGAGCAAGAAAATGTGATGGGGATGTGTCAACAAGTGAATAGAAATAATTTCTCTCTGGATCAAAATCAGTTTAGTCCTCAATATAGTTCTGGAGATAGTAATGTTATTACAAGCCAATGTTTACCAACAAATTTTCAAATGGATTCTTCAACTTTATATGGAACTCCATCAATTTTACAAGGTTCATTTGAGAACAGATCCATGAGTAGTACTTTTCCATATCCAACAAATAACTATGGATTAAACTCTAATAATGAGTTGAATATTATGCCAGCTTCTAATAATTGGTCTAATAATAAAGTTCCTCAATTTTTTATGAGAACTTCACCTCCAAAACAACCAACCAATAACCAGTTGCATTTTACTAACAACACCCCTTTTTGGAATGCTTCTGAGGCTCCTAATTCCGTCAAGGATGTTAGGTCTACTTTCTTCCCCTCTTTGCAACCTCAATTTTCCCCTTCAAATTTTGATTCACATTCAAAGAATATATCTGAAGTAAGTGTGGTGAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCAACTTTGCCAGCTTTTAAGGTGAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTAGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATATATTAAATTTCTCCATGAACAGGTTACTGTTTTGAGCACACCATACATGAAAAGTGGAGCTCCATCAGAGATTCAACAGAATTCTGGTAAATTAAAAAAATGTGAGGGCACAAAGCAAGATCTAAAAAGTCGAGGACTATGTTTGGTACCAGTTTCTAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGGACATCAAGATAA 1311 0.3631 MADDDQFHHSSGNWWDTASRNMRFNQSGGTSQSSSSTITNNIVDFAWQNSDMVEIKPRSSMENSSVVFHDNQKLQQPQDSSTSSDPNLHMMGLGLSSHTLDWNQPSLIGEKGTENSFRSILEENLSSTRNNFEQENVMGMCQQVNRNNFSLDQNQFSPQYSSGDSNVITSQCLPTNFQMDSSTLYGTPSILQGSFENRSMSSTFPYPTNNYGLNSNNELNIMPASNNWSNNKVPQFFMRTSPPKQPTNNQLHFTNNTPFWNASEAPNSVKDVRSTFFPSLQPQFSPSNFDSHSKNISEVSVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPSEIQQNSGKLKKCEGTKQDLKSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2726 436 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 22 425 - -
Mtr2g2726 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Mtr2g2726 436 SMART finulus 327 371 IPR011598 GO:0046983
Mtr2g2726 436 CDD bHLH_AtbHLH_like 322 373 IPR045239 -
Mtr2g2726 436 Gene3D - 326 394 IPR036638 GO:0046983
Mtr2g2726 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 425 - -
Mtr2g2726 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 378 IPR036638 GO:0046983
Mtr2g2726 436 MobiDBLite consensus disorder prediction 61 89 - -
Mtr2g2726 436 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2726 Mtr-Chr2 40448987 40453749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2726 251 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.616 1.49e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2726 - - gmx:100796549 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2726 2 40448987 40453749 Mtr2g2726 2 40448987 40453749 ECH