Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2722 ATGAGACAAGCAGGTGCATATTCAGGTATAGTAAATGGTGGCATAGGAAGAACAGGTCCACATTCATTACCATTAGCAAGAATAAAGAAGATAATGAAGAATTCTAGTGAAGACGTGAAAATGATATCAGGGGTTGCTCCAATTGTTTTCTCAAAAGCTTGTGAACTTTTCATTGAAGAACTTACAAGAAGGTCTTGGATTATGGCTATTGATGCTAAAAGAAGAACTTTGAATAAAGAAGATGTTGCTTCTGCTGTTATAGCTACTGATATTTTTGATTTTTTGATCACTTTGGTTTCTAATTCTGATTCTAGTACTGATGCCACCACTCTCATGCAAATGGAAAGTATATGA 354 0.3475 MRQAGAYSGIVNGGIGRTGPHSLPLARIKKIMKNSSEDVKMISGVAPIVFSKACELFIEELTRRSWIMAIDAKRRTLNKEDVASAVIATDIFDFLITLVSNSDSSTDATTLMQMESI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2722 117 SUPERFAMILY Histone-fold 14 95 IPR009072 GO:0046982
Mtr2g2722 117 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 108 - -
Mtr2g2722 117 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 22 86 IPR003958 -
Mtr2g2722 117 PANTHER HAP5 SUBUNIT OF HAP COMPLEX 1 108 - -
Mtr2g2722 117 Gene3D Histone, subunit A 14 101 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2722 Mtr-Chr2 40366706 40367173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2722 21 111 CCAAT-HAP5 Transcription Factor Family AT3G48590 60.440 9.91e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mtr2g2722 CBFD_NFYB_HMF 2.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2722 - - gmx:100777614 182.956