LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g2721	ATGGTGAATTCTAAGTGGTCTCAAATTTTGTTCAAAGACATCATAACATTGGCAGCCCTTTTCCTATGCAACATCATATTAGCCTTTACAACTGACCACCAACAAGAGCAAGACAGGATTGGAACAGCACTCCCAGGTCAAAACTTCAACATCAACTTTGAACACTATTCTGGTTATATTACAGTTAACAAGGATGTTGGTAGGACACTATTTTACTGGTTCATTGAAGCAGATCATATAGATCCTACTTCAAAACCTCTTCTTTTATGGTTCAATGGTGGTCCTGGTTGTTCATCTATTGCTTATGGTGAGGCTGAGGAAATTGGTCCTTTTCATATTAATTCAGATGGCAATACCCTTCATCTTAATCCTTATTCATGGAATCAAGTTGCCAACATTCTTCTTATTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAATGCTTCTTCTGATATTCTCAACAATGGAGATAAGAGGACAACTGAGGACTCTCTCATATTTCTCTTGAAGTGGTTTGAGCGTTTTCCTCGGTATAAAGAAACAGACTTTTTCATTAGTGGTGAGAGCTATGCAGGACATTATGTTCCCCAACTTAGCCAAGTTATTGTCAAGCACAACTCAGCTACAAAACAAAATTCTATAAATCTCAAAGGTTACATGGTAGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGAATGTTCCAGTTTATGTGGACAAATGGTATGATTTCAGATCAAACATTCAAGCTCTTGAACCTGCGATGTGATTTTCAGTCGGTCAAACACCCGTCAGAGTCATGTGAAAAAATCTGGGAAATTGCTGAAAAGGAACTTGGTAATATAGATCCATACAGTATCTTTGCCACTCCTTGCCATGCTAATGATAATCAGATGGTTAAAGGAAAGCATCGTGTTGGAAATCTCAGAACTGTATATGATCCTTGCACCTCCAAGCACAGCACTACATACTTCAATCTACCAGAGGTCCAAAGGATTCTACATGTTCATCCAGATCATAGGCCTGCTAAATGGCAGACCTGCAGTGTTGTGGTAGCTATTAACTGGAAGGATTCTCCTAGAACAGTGCTCAATATATACCGAGAACTTATTCCTACCGGACTGCGAATATGGATGTTCAGTGGTAATACAGATGCTGTACTCCCGGTAACATCTACTCGCTATTCCATAGATGCTCTCAAGCTTCCAACTGTGAGCCCCTGGCGTGCATGGTATGATGATGGGGAGGTAGCAGGGTGGACTCAAGAATATGCCGGACTCACGTTTGTAAATGTAAGGGGTGCAGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAGCATTGTTCAAATCCTTCTTGGCAGGAACCTCGATGCAAACGCTTGAACCACCTACCCTCAGAACCGCCTCTTGA	1425	0.4098	MVNSKWSQILFKDIITLAALFLCNIILAFTTDHQQEQDRIGTALPGQNFNINFEHYSGYITVNKDVGRTLFYWFIEADHIDPTSKPLLLWFNGGPGCSSIAYGEAEEIGPFHINSDGNTLHLNPYSWNQVANILLIDSPVGVGFSYSNASSDILNNGDKRTTEDSLIFLLKWFERFPRYKETDFFISGESYAGHYVPQLSQVIVKHNSATKQNSINLKGYMVGNALTDDFHDQLGMFQFMWTNGMISDQTFKLLNLRCDFQSVKHPSESCEKIWEIAEKELGNIDPYSIFATPCHANDNQMVKGKHRVGNLRTVYDPCTSKHSTTYFNLPEVQRILHVHPDHRPAKWQTCSVVVAINWKDSPRTVLNIYRELIPTGLRIWMFSGNTDAVLPVTSTRYSIDALKLPTVSPWRAWYDDGEVAGWTQEYAGLTFVNVRGAGHEVPLHRPKLALALFKSFLAGTSMQTLEPPTLRTAS*	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g2721	474	Pfam	Serine carboxypeptidase	45	458	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	Gene3D	-	365	459	-	-
	Mtr2g2721	474	Gene3D	alpha/beta hydrolase	35	296	IPR029058	-
	Mtr2g2721	474	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	15	465	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	ProSitePatterns	Serine carboxypeptidases, histidine active site.	429	446	IPR033124	GO:0004185
	Mtr2g2721	474	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 29	15	465	-	-
	Mtr2g2721	474	PRINTS	Carboxypeptidase C serine protease (S10) family signature	123	135	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	PRINTS	Carboxypeptidase C serine protease (S10) family signature	136	146	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	PRINTS	Carboxypeptidase C serine protease (S10) family signature	172	197	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	PRINTS	Carboxypeptidase C serine protease (S10) family signature	429	442	IPR001563	GO:0004185\|GO:0006508
	Mtr2g2721	474	ProSitePatterns	Serine carboxypeptidases, serine active site.	186	193	IPR018202	GO:0004185
	Mtr2g2721	474	SUPERFAMILY	alpha/beta-Hydrolases	41	461	IPR029058	-
	Mtr2g2721	474	Gene3D	-	318	354	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g2721	Mtr-Chr2	40360432	40366155	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g2721	376	462	Calmodulin-binding Proteins	AT2G22960	28.409	2.00e-09	55.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g2721	K16297		-	gmx:100805227	709.138