Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2702 ATGGCCCCCGATCAACATCACTCAAGTTTTAATTCAAACATGCAACACTATTACTACAACACCACTGATGATGACATCGACGATATCGTCAACAACGAGGTTGTTAACGATAGCGACGAGTACGAGGAGGACGAGTATCAGTATCACTACGAAGAAGATGATGAAAAAGAAGAAACCAAACAGCCACAAAAACGTTGTTCATCTTCTTTTTCATTGAGTAAGGTATTACTTGATCCAAGAGGAAAATGGGCTGAAGAATGGAATAGAGTATTTCTTTTGGTGTGTGCAATGGGGTTATTTGTGGACCCACTTTTCTTCTATGCAATCTCTATAAGTGACACGTGTATGTGTCTATTTATAGATGGTTGGTTTCTAGTTACCGTCACCGTTATCCGTTGCATGACGGACATGTTACATCTCTGGAATATTTGGTTGCAGTTTTATATTCATAAACATAAACGCTCCTCTTTTGGCTTCATTCATCATGGAACTCTTTCTTCTAACTCCTTCAAAGTCAACAAAGCCTTTTTCTTTAACATCTTTATCCTCCTCCCTCTCCCTCAGATTGTGCTATGGGTGACAATTCCATCTTTGTTAGAGCAAGGATCGATTGCGCGGGTGATTACTGTATTGTTGATTATGTTCCTGTTTCAATACCTTCCTAAAATTTATCACTCAGTTTGCTTCGTGCGTCGAAACCTCACAAATGGTTTCATTTTTGGAACCGTTTGGTGGGGATTCGCTATCAATATGATCGCTTATTTTGTCGCTTCCCATGCAGCAGGGTCATGTTGGTATTTGTTGGGACTTCAAAGGGCAGCAAAGTGTCTAGAAGAGCAATGTGAGACAACACCTGGTTGTGGACTAAGAACACTGTGTTGCAAAGAACCAATATACTATGGAAACTATAACATGTTGAAGAAGTTAGACAGAACAAGGTTGGTATGGTCACAGAACACAGAAGCAAGGTCTACATGTTTAGCTAGTGCTGATAACTATGAATTTGGAGTTTATGAATGGAGTGTTCAACTTGTTACAAATAATAGTCGAATTGAAAAGATACTCCTTCCTATCTTTTGGGGCCTAATGACTCTCAGCACTTTTGGGAACCTCCAGAGTACAACGGAAAGGATGGAAGTCGTTTTCAACACTATTATATTAACCAGTGGCCTCCTTCTAGTCACTATGCTAATTGGAAACATCAAGGTATTTTTACATGCTACAACGTCAAAGAAGCAAGCAATGAAATTGAAGATGACAAACATGGAGTGGTGGATGAACAAAAGACGGTTGCCACAAGGACTTCGGCAGCGTGTGCGTAACTACGAGAGACAGTGTTGGGCTGCCATGCGCGGCGTTGATGAATGTCAGTTGATAAAAAATCTCCCGGAGGGTTTGAGAAGGGATATCAAGTACCATCTTTGTTTGGGTTTGGTGAGACAGGTACCACTTTTTCAACATATGGATGAATTGGTCCTAGAGTACATTTGTGACCGTGTCAAGTCCCTTGTATTCACAAAGGGAGAAACATTAACAAGAGAAGGAGACCCAGTTCGTAGAATGCTATTTGTGGTAAGGGGTCACCTTCAAAGTAGCCAATTCCTAAGAGATGGAGTTAAAAGTTGTTGTATGTTAGGACCAGGAAACTTCAGTGGAGATGAGCTTCTATCATGGTGTTTAAGAAGGCCATTTATAGAACGTCTTCCAACATCATCGTCAACTTTGGTGACGCTTACAACAGTCGAAGTATTTGGACTTGAAGCAGAGGATGTCAAATATGTGACGCAAAATTTTAGGTACACATTTGCAAAAGAAAATGTTAGAAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAGGCATAGGTTGACTTTGAGTTCTTTGTCCTTTATTAGGCCTCGTAGGCCTTTGTCAAGGTCTACTTCTTTAGAAGAGGATAGACTTCGTCTCTATACAGCTTTGCTAACCTCGCCAAAGCCTAATCAGGATGGTTTTGACTCTTCATAA 2049 0.4065 MAPDQHHSSFNSNMQHYYYNTTDDDIDDIVNNEVVNDSDEYEEDEYQYHYEEDDEKEETKQPQKRCSSSFSLSKVLLDPRGKWAEEWNRVFLLVCAMGLFVDPLFFYAISISDTCMCLFIDGWFLVTVTVIRCMTDMLHLWNIWLQFYIHKHKRSSFGFIHHGTLSSNSFKVNKAFFFNIFILLPLPQIVLWVTIPSLLEQGSIARVITVLLIMFLFQYLPKIYHSVCFVRRNLTNGFIFGTVWWGFAINMIAYFVASHAAGSCWYLLGLQRAAKCLEEQCETTPGCGLRTLCCKEPIYYGNYNMLKKLDRTRLVWSQNTEARSTCLASADNYEFGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGNLQSTTERMEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNMEWWMNKRRLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLEYICDRVKSLVFTKGETLTREGDPVRRMLFVVRGHLQSSQFLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPTSSSTLVTLTTVEVFGLEAEDVKYVTQNFRYTFAKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLSSLSFIRPRRPLSRSTSLEEDRLRLYTALLTSPKPNQDGFDSS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2702 682 Gene3D Jelly Rolls 482 600 IPR014710 -
Mtr2g2702 682 Gene3D Helix hairpin bin 409 475 - -
Mtr2g2702 682 ProSiteProfiles cAMP/cGMP binding motif profile. 484 594 IPR000595 -
Mtr2g2702 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 14 678 - -
Mtr2g2702 682 CDD CAP_ED 484 590 IPR000595 -
Mtr2g2702 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 14 678 - -
Mtr2g2702 682 SUPERFAMILY cAMP-binding domain-like 410 598 IPR018490 -
Mtr2g2702 682 SUPERFAMILY Voltage-gated potassium channels 78 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2702 Mtr-Chr2 40118836 40123374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2702 76 680 Ion Channels AT5G54250 73.214 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2702 K05391 - gmx:100800795 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2702 2 40118836 40123374 Mtr2g2702 2 40118836 40123374 ECH