Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2678 ATGGAAAGTACCGATTCATCGACTGGTTCGCAACAACCGAATCTCCCGCCTGGATTCCGATTTCACCCTACAGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCAGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGGGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACCGATAAGCCTGTTTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGGAAACCACCAAGAGGTATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTCAGGCTTGATGATTGGGTTTTGTGCCGGATCTACAAGAAAAGCAACACACATAGGTCACCGGTGGAACATGATAGGGAAGATTCAATGGATGATATGATTGGAGGAGTACCACCATCAATCAACGTGGGCCAAATGAGTGTTGCATCAAGGTTTCATAATTTTTCAAGGTTGTCATCAAATAACTACAACAATGCATTGTTGGAAAATGACCAAAATTTATTAGAAGGAATGATGATGAATAACAACAATACTTTAGGAGGTTCAAATTCAAAGGCTGAACTATCTTTTGTACCAACTATGACAACATCTTCAAATGCTAATTCACCTTCCAAAAGAACACTCTCTTCTCTTTACAATTGGAATGATGAAGATGTTGCAGCTCAAGTTGGTACTTCATCATCTAACAAAAGGTTTAGTTTGGAAAATGTTGTGAGGAATGATCAAGAGAATGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATCTCCCTCAAACATCTTCATTGCATCAACCACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGTTAA 1065 0.4 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSMDDMIGGVPPSINVGQMSVASRFHNFSRLSSNNYNNALLENDQNLLEGMMMNNNNTLGGSNSKAELSFVPTMTTSSNANSPSKRTLSSLYNWNDEDVAAQVGTSSSNKRFSLENVVRNDQENGTVATSFASLLNNLPQTSSLHQPQTMLGSIPYQIQGMNWYG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2678 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mtr2g2678 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Mtr2g2678 354 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g2678 354 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 333 - -
Mtr2g2678 354 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Mtr2g2678 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Mtr2g2678 354 MobiDBLite consensus disorder prediction 1 17 - -
Mtr2g2678 354 PANTHER NAC TRANSCRIPTION FACTOR 56 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2678 Mtr-Chr2 39872303 39874476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2678 1 353 NAC Transcription Factor Family AT3G15510 53.743 3.75e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2678 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2678 - - gmx:100170710 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2678 2 39872303 39874476 Mtr2g2678 2 39872303 39874476 ECH