Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2677 ATGATAATGGGAATTCAAGACAAAGACCCACTTGCACAATTGAGTTTACCTCCTGGTTTTAGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGCAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGATTCTTCCAAGTAAGGCCATTTTTGGGGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACAAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCAACTGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATCAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCAAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATTCTTCACGAAACAACGGTGGCACCAAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAATTCAAGTGCACAAAAACCTATTCCAAACGGCGTCATTTCAAGCAGGGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTTGAATCACTTCCACAGATTGACGACCGTTGCTTCAAGCTGCCACATGTCAACTCGCTAAGAACAACGCAGCATCGCCAACAAGAAGAAGAAGAGAAGCTGAATCTTCAAAATAACAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGAAGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCCACGTTATGTCAAATGGACTCTTCCGTTATTACGGAGAAAACTAGCAACATATCCGTGCATCCAACTGAAGAGGAGGTTCAGAGTGGGGCCAAAGCAAACCAAGTCGAGAATTCGTCTGGGTTTTTTCAACGCGGTTCAAATGATTTTACTCAAGGAATGGGATACGCTAATCCGGTTGACCCGTTTGGGTTTAGATACCCAGTTCAACCGGTTGGATTTGGATTCCAACAATGA 1065 0.4066 MIMGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWILPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVISSREYTQYSNGSSSSSSSHLDDVLESLPQIDDRCFKLPHVNSLRTTQHRQQEEEEKLNLQNNNFMDWSNSSSILNTVTGFQEGQTQGMMNFSGCNDLYVPTLCQMDSSVITEKTSNISVHPTEEEVQSGAKANQVENSSGFFQRGSNDFTQGMGYANPVDPFGFRYPVQPVGFGFQQ* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2677 354 Coils Coil 220 240 - -
Mtr2g2677 354 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Mtr2g2677 354 ProSiteProfiles NAC domain profile. 16 164 IPR003441 GO:0003677|GO:0006355
Mtr2g2677 354 PANTHER NAC TRANSCRIPTION FACTOR 56 3 325 - -
Mtr2g2677 354 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Mtr2g2677 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 3 325 - -
Mtr2g2677 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2677 Mtr-Chr2 39839381 39841170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2677 3 341 NAC Transcription Factor Family AT1G52890 56.725 4.91e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2677 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2677 - - mtr:MTR_2g079990 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2677 2 39839381 39841170 Mtr2g2677 2 39839381 39841170 ECH