Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2632 ATGGAGGAGAATTCTGAGAGTTCTAGGGCTTTGAATAGTTCTGGAGTCTCAGATAGGAATCAAAGGGAAAATCCTTTCTCCGGCGAGGGATCACAAGATTCTAGGTTTAGAAAAGAAAGGGATTGGATTCATGGTGCACAAGGTGATCAAAACAAAAACCTAGGTGGGTTTTGTGAGGGTGAAGAAGTAGAGAATGATCCTTTCTTTTCTTCAGTTGAATGGGGTGATATTAGTTTGAGGCAATGGTTGGATAAACCAGATCGATCCGTAGATTTCTTTGAATGCTTACACATATTTAGACAAATAGTTGAGATTGTTAATGCAGCACACTGTCAAGGCGTTGTTGTTCATAATGTGAGGCCTTCGTGCTTTGTCATGTCGTCTTTCAACCATATCTCGTTTATTGAATCGGCTTCTTGTTCGGATACCAGTTCAGATTCTTTAGGAGATGGAGTAAACAACGACCAAGGTGTTGAGGTTAAAACTCCAACATCTCACTGTCCTCGTGATATTATGCATCAGCAGAGTTTCGGAAGTGAAGATTTTATGCCTGCCAAGATTTCGACGGATGCTCGGTCTGATTCTAGTTGCATGCTGTCAAGTGCAGTGTACGCAGCTCGTGCGTCGTTAATTGAAGAAACAGAAGAAAATAAAATGAAAGATATGAGGAAGGATGAAGAAGTGGAAGGTAAGAAGCAATCGTTTCCGATGAAACAGATACTTCTAATGGAGATGAGTTGGTACACAAGTCCTGAAGAGGTTGCTGGTACTCCTAGTTCATGTGCTTCGGATGTTTACCGATTGGGGATTCTCCTTTTCGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAAAGTAGAACAATGTCTAGTCTCAGACATAGAGTTCTTCCTCCACAATTACTTCTAAAGTGGCCTAAGGAAGCTTCATTTTGCTTATGGTTACTACATCCTGACCCTAGCAGTCGTCCAACACTAGGGGAGTTGTTGCAGAGCGAGTTCCTCAATGAACAAAGAGATGATATGGAAGAACGTGAAGCAGCAATAGAGCTTAGACAAAAGATAGAAGATGAGGAGTTGTTGCTAGAATTCCTTTCATTACTTAAACAAAGAAAACAAGAAGTTGCTGAAAAGTTGCAACATACTATCTCTTTTCTATGTTCAGATATTGAAGAAGTGACCAAGAAGCAAACTAGATTTAAAGAGATTGCTGGCGTTGAACTAGGAGGGAGTGATGACCGTTCAGCATCAACTTTTCCATCTATGACAGTCATTGATAGTGAGGATTCTGCTTGTTTAGGAACTAGAAAACGAGTCAGACTAGGGATGCATCTCGATGAATGTGATGATAACATGGAGAGTGATCAGAAAAATCATGGAAGTTTTCTTTCAAAAAATTCGCGACTAATGAAAAACTTTAAAAAGCTCGAGTCAGCATACTTTTTAACACGATGCAAACCAACCTATTCCTCAGGAAGACCGGGGGTTAGACATTCAACTATAGCAAATGGTGGGAGAGGGTCTGTCGTCATGAGTGAAAGAAGTTGCATCAATAGCTTGGCGTTGAAAGACCAAGGAAGGGACAGCGCAAGTGCTTGGATAAATCCTTTTCTTGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTTAAAGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTCGACCGTGATGGAGAATTTTTTGCAACCGCTGGTGTTAATAAGAAAATCAAAATATTTGAATGTGATACAATCATAAAAGGGGATCGTGATATCCACTATCCGGTAGTGGAGATGGCTTGCAGGTCAAAGCTGAGCAGTTTATGTTGGAATACATACATCAAAAGTCAAATTGCTTCAAGTAATTTTGAAGGTGTTGTACAGCTATGGGACGTTACAAGAAGCCAAATACTATCTGAAATGAGGGAGCACGAGCGGCGAGTGTGGTCGATTGATTTCTCATCAGCAGATCCAACAATGTTGGCGAGTGGCAGCGACGACGGTTCAGTTAAGCTATGGAGTATCAATCAGGGAGTTAGTATCGGCACGATCAAAACGAAGGCAAATGTATGCTGTGTTCAGTTTCCTCTGGATTCCGCTCGATACCTCGCTTTTGGTTCGGCAGATCACCGGATATATTACTATGATCTTCGCAACTTAAGAGTGCCGCTTTGCACTTTAGTTGGACATAATAAGACCGTGAGCTACATCAAGTTTGTAGACAATGTCAACCTTGTATCTGCATCCACAGACAACACTTTGAAGCTTTGGGATTTGTCTACATGTACATCTCGAGTTGTTGACTCGCCGATTCAATCATTCACTGGTCACACGAATGTGAAGAATTTTGTGGGATTATCAGTATCTGATGGTTATATTGCGACTGGTTCAGAGACAAATGAGGTGTTCGTATACCACAAGGCCTTCCCTATGCCAGCATTACAATTCAAGTTTCAGAACACAGATCCAATTTCTGGTAACGAAGTGGACGATGCTGCACAGTTCGTCTCCTCGGTTTGCTGGCGTGGTCAATCACCAACCCTTATCGCCGCAAACTCCACAGGGAATGTCAAGATTCTCGAGATGGTTTGA 2628 0.4178 MEENSESSRALNSSGVSDRNQRENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGFCEGEEVENDPFFSSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGVEVKTPTSHCPRDIMHQQSFGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDMRKDEEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGVELGGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGMHLDECDDNMESDQKNHGSFLSKNSRLMKNFKKLESAYFLTRCKPTYSSGRPGVRHSTIANGGRGSVVMSERSCINSLALKDQGRDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYYYDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVVDSPIQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILEMV* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2632 875 Gene3D - 539 875 IPR015943 GO:0005515
Mtr2g2632 875 ProSiteProfiles Trp-Asp (WD) repeats profile. 653 695 IPR001680 GO:0005515
Mtr2g2632 875 ProSiteProfiles Trp-Asp (WD) repeats profile. 739 773 IPR001680 GO:0005515
Mtr2g2632 875 PANTHER PROTEIN SPA1-RELATED 2 2 875 IPR044630 GO:0009640
Mtr2g2632 875 SUPERFAMILY Protein kinase-like (PK-like) 64 337 IPR011009 -
Mtr2g2632 875 ProSiteProfiles Protein kinase domain profile. 1 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2632 875 MobiDBLite consensus disorder prediction 1 41 - -
Mtr2g2632 875 MobiDBLite consensus disorder prediction 7 31 - -
Mtr2g2632 875 SMART serkin_6 16 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2632 875 ProSitePatterns Trp-Asp (WD) repeats signature. 757 771 IPR019775 -
Mtr2g2632 875 Gene3D Transferase(Phosphotransferase) domain 1 76 346 - -
Mtr2g2632 875 CDD WD40 568 871 - -
Mtr2g2632 875 PRINTS G protein beta WD-40 repeat signature 630 644 IPR020472 -
Mtr2g2632 875 PRINTS G protein beta WD-40 repeat signature 673 687 IPR020472 -
Mtr2g2632 875 PRINTS G protein beta WD-40 repeat signature 757 771 IPR020472 -
Mtr2g2632 875 Pfam WD domain, G-beta repeat 649 686 IPR001680 GO:0005515
Mtr2g2632 875 Pfam WD domain, G-beta repeat 735 770 IPR001680 GO:0005515
Mtr2g2632 875 Pfam WD domain, G-beta repeat 563 592 IPR001680 GO:0005515
Mtr2g2632 875 PANTHER PROTEIN SPA1-RELATED 3 2 875 - -
Mtr2g2632 875 SMART WD40_4 558 593 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 732 770 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 834 873 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 779 818 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 689 728 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 607 643 IPR001680 GO:0005515
Mtr2g2632 875 SMART WD40_4 646 686 IPR001680 GO:0005515
Mtr2g2632 875 SUPERFAMILY WD40 repeat-like 563 872 IPR036322 GO:0005515
Mtr2g2632 875 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 653 690 - -
Mtr2g2632 875 Coils Coil 332 352 - -
Mtr2g2632 875 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 739 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2632 Mtr-Chr2 39350751 39356243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2632 643 817 Miscellaneous Gene Families AT5G08390 25.989 8.37e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Mtr2g2632 WD40 9.9e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2632 - - gmx:100811457 1479.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2632 2 39350751 39356243 Mtr2g2632 2 39350751 39356243 ECH