Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2611 ATGGTCCATGTTCTACTTCCTTTTCTGTTTAGAGGGGTATCCTATCTCTTTCTTCAAGGAATGGTGTTACTCAGATGTTTCTGGTTGTCACTGTTTGAATGTTGTGTCTTGTCTTGCTTTTTTGGTTTGTCTTTGAGTCTTGACAATGGAACAAAATCATGTAATCCTAGTGATTTATTAGCTCTGAAGGAGTTTGCAGGCAACCTTACAAATGGTTCAATTATCAAGTCATGGTCCAATGATAGTGTTTGTTGCAATTGGATTGGAGTTGTGTGCGGTGATAATAATGGAGAAGCTGTTGATAGAGTGACCAAGTTGAGCCTTTCTGAAATGAGTCTCAATGGAACAATTTCACCCTCTTTAGCAAAACTAGATCATCTCACTGTGCTGAATCTTTCATTCAATCATCTTCATGGTAGATTGCCTTTGGAATTGTCAAAGTTGAAGATGTTGAAGTTTCTTGATTTGAGCTATAACATGTTGTTAGGAGGTGTGAATGAATCACTTTCTGGTTTGAAGTCCATTGAAGTGTTGAATATTTCAAGCAATTCATTTTCTGATAAAGTTTTCCACCTTGGTGAATTTCCTCATCTACTTGCACTCAATGTGAGTAACAATTCATTCTCTGGTGGATTCAGTTCTCAAATTTGCAATTCTTCAAGAGATCTTCACACACTTGATTTATCTTTAAATCAGTTTAGTGGTGATCTTGAAGGTTTGAACAACTGCACTGTTTCTCTCCAAAGGTTACATTTAGATTCCAATTCATTTTCTGGCCCTTTTCCTGAGTCATTGTATTCAATGTTATCATTGGAGAGATTATCACTCTCTGCCAACAATTTTTCTGGCAAGTTAAGCAAGGAGTTAAGTAAGCTTACTAGCCTAAAATCTCTTGTGGTTTCTGCAAACCATTTTTCAGGCGAAATCCCGAATGTGTTTGGGAACATTTTGCAGTTAGAACAATTTGTAGCACATGCTAATTCATTTTCTGGACCATTACCTTCCACTTTGGCTTTATGCTCTAAGCTTAAAGTGCTTGATCTTAAAAACAATTCATTGTCAGGTTCAATTGATCTTAATTTCACTGGTTTGTCAAATCTTTGTTCACTTGATCTTGCTAGTAATCATTTTACTGGACCACTTCCTAGTTCATTGTCCTATTGTCATGAATTGAAAGTTTTAAGCCTTGCTAGGAATGGTTTAAATGGTTCTATACCTGAAAGCTATGCCAAATTGTCTTCCCTTTTGTTTGTATCTTTTTCAAACAACAGCTTAGATAATTTATCTGGTGCACTTTCTGTTCTTCAGAAGTGCAAAAACCTCACAACTCTTATCCTCACTAAGAATTTCCACGGTGAAGAAATTCCACAAAATCTGCCTGGAGGATTTGAGAGTCTTATGGTGTTAGCACTCGGAAACTGCGGTCTGAAGAGTCATATTCCTTCTTGGCTGTTAAAATGCAAGAAATTGGCTGTACTTGATTTGTCTTGGAACTCTTTGAATGGCAGTATGCCTTCGTGGATTGGTCAAATGGACAAATTGTTCTATTTGGATTTCTCAAACAATTCTCTCTCAGGTGAAATACCGAAAAGTTTGACAGAGTTGACGGGACTTGTATGTTCAAATTGTGGAAGACCAAATTTTGCTTCTTATGCTTTCATTCCACTCTTTGTTAAGAGAAATACTAGTGCTAGTGGTTTGCAATATAATCAAGCTTCAAGTTTCCCTCCTTCCATTTTGTTGAGCAATAACATATTAAGTGGAAGTATATGGCCTGAAATTGGTAAGATGAAGGCACTGCATGTGTTGGATTTCAGCAGGAACAACATCAGTGGTACAATTCCTAGCACTATTTCAGAGATGGAGAATTTGGAAACATTAGATTTATCTTATAATGATCTCTCTGGTACAATCCCTCCTTCATTTAACAACCTCACATTCTTGTCGAAGTTCAGTGTGGCGTATAATCGCTTGCAAGGACCGATTCCAAGTGGAGGGCAGTTTTTAAGCTTCCCTAATTCAAGCTTTGAGGGAAATTTGGGACTTTGCAGGGATTTTGATGTTGATAATACTCCTTGCAAAGTTGTTAACAATATGAGGCCAAATATGTCTTCTGGTTCATCCAGAAAATTTAGTAGAAGCAATGTTCTTGGCATAACAATCAGCATAGGGATAGCGCTTGCTTTGTTGCTTGCAGTTATTGTGCTAAGAATGTCAAAGAGGGAAGAAGATAAGCCAATTGATAGCTTTGATGAGGAGATGAGTGGAAGGCCACGCAGGTTATCATCTGAAGGGTTTGTTGCTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGTAAGGATCTCACAGTTTCGGATTTGTTAAAAGCAACAAGCAATTTCAACCAGGCGAATATTGTCGGTTGCGGTGGCTTCGGTCTTGTTTACAAGGCGTATCTTCCAAACGGCATGAAAGCAGCTGTCAAGAGGCTTTCTGGCGACTGCGGTCAGATGGAACGTGAATTTCAAGCCGAAGTCGAAGCCCTCTCGAGAGCTCAACACAAGAACCTTGTTTCTCTTAAAGGCTATTGTCGGCATGGCAACGACCGGTTGCTAATTTACTCATATATGGAGAACGGTAGCTTGGATTATTGGCTTCACGAGTGTGTGGATGGAAATTCAGCTCTGAAATGGGATGTACGACTCAAGATTGCTCAAGGCGCGGCTCATGGATTAGCTTACTTGCATAAGGATTGTGAACCGTACATTGTGCACCGCGACATCAAATCTAGCAACATACTTTTGAATGATAAGTTTGAAGCTCATTTGGCTGATTTTGGTCTCTCAAGACTACTTTCACCATACGATACTCATGTCACAACGGACTTGGTAGGAACTTTAGGGTATATTCCTCCAGAATATAGTCAGACACTGACAGCAACATTCCGCGGCGATGTCTATAGTTTCGGCGTTGTTCTTCTTGAGCTTCTTACAGCTAGAAGGCCTGTTGAAGTCATCAAGGGGAAAAACTGCAGGAATCTTGTGTCTTGGGTTTATCAGATGAAATATGAAAATAAGGAGCAGGAAATATTTGATCAAACCATTTGGGAAAAGGAAAGGGAGAAACAACTATTGGAAGTACTTTCCATTGCTTGTAAATGTCTTGATCAAGATCCAAGGCAAAGACCTTCTATTGAAATGGTTGTTTCATGGCTTGATAGTGTAAAAGTTGATGGCTTTCAACAATGA 3228 0.3882 MVHVLLPFLFRGVSYLFLQGMVLLRCFWLSLFECCVLSCFFGLSLSLDNGTKSCNPSDLLALKEFAGNLTNGSIIKSWSNDSVCCNWIGVVCGDNNGEAVDRVTKLSLSEMSLNGTISPSLAKLDHLTVLNLSFNHLHGRLPLELSKLKMLKFLDLSYNMLLGGVNESLSGLKSIEVLNISSNSFSDKVFHLGEFPHLLALNVSNNSFSGGFSSQICNSSRDLHTLDLSLNQFSGDLEGLNNCTVSLQRLHLDSNSFSGPFPESLYSMLSLERLSLSANNFSGKLSKELSKLTSLKSLVVSANHFSGEIPNVFGNILQLEQFVAHANSFSGPLPSTLALCSKLKVLDLKNNSLSGSIDLNFTGLSNLCSLDLASNHFTGPLPSSLSYCHELKVLSLARNGLNGSIPESYAKLSSLLFVSFSNNSLDNLSGALSVLQKCKNLTTLILTKNFHGEEIPQNLPGGFESLMVLALGNCGLKSHIPSWLLKCKKLAVLDLSWNSLNGSMPSWIGQMDKLFYLDFSNNSLSGEIPKSLTELTGLVCSNCGRPNFASYAFIPLFVKRNTSASGLQYNQASSFPPSILLSNNILSGSIWPEIGKMKALHVLDFSRNNISGTIPSTISEMENLETLDLSYNDLSGTIPPSFNNLTFLSKFSVAYNRLQGPIPSGGQFLSFPNSSFEGNLGLCRDFDVDNTPCKVVNNMRPNMSSGSSRKFSRSNVLGITISIGIALALLLAVIVLRMSKREEDKPIDSFDEEMSGRPRRLSSEGFVASKLVLFQNSDCKDLTVSDLLKATSNFNQANIVGCGGFGLVYKAYLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHECVDGNSALKWDVRLKIAQGAAHGLAYLHKDCEPYIVHRDIKSSNILLNDKFEAHLADFGLSRLLSPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTARRPVEVIKGKNCRNLVSWVYQMKYENKEQEIFDQTIWEKEREKQLLEVLSIACKCLDQDPRQRPSIEMVVSWLDSVKVDGFQQ* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2611 1075 ProSiteProfiles Leucine-rich repeat profile. 222 244 IPR001611 GO:0005515
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 468 537 - -
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 634 1068 - -
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 182 - -
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 579 637 - -
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 301 456 - -
Mtr2g2611 1075 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 182 301 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 634 1068 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 579 637 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 301 456 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 468 537 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 52 182 - -
Mtr2g2611 1075 PANTHER PHYTOSULFOKINE RECEPTOR 2 182 301 - -
Mtr2g2611 1075 Pfam Protein kinase domain 795 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2611 1075 SUPERFAMILY RNI-like 245 544 - -
Mtr2g2611 1075 SUPERFAMILY L domain-like 478 683 - -
Mtr2g2611 1075 CDD STKc_IRAK 800 1066 - -
Mtr2g2611 1075 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Mtr2g2611 1075 Gene3D Ribonuclease Inhibitor 285 383 IPR032675 -
Mtr2g2611 1075 Gene3D Ribonuclease Inhibitor 56 189 IPR032675 -
Mtr2g2611 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Mtr2g2611 1075 Gene3D Transferase(Phosphotransferase) domain 1 870 1072 - -
Mtr2g2611 1075 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Mtr2g2611 1075 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Mtr2g2611 1075 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Mtr2g2611 1075 Pfam Leucine rich repeat 599 658 IPR001611 GO:0005515
Mtr2g2611 1075 Gene3D Phosphorylase Kinase; domain 1 759 869 - -
Mtr2g2611 1075 Gene3D Ribonuclease Inhibitor 389 698 IPR032675 -
Mtr2g2611 1075 SUPERFAMILY Protein kinase-like (PK-like) 776 1065 IPR011009 -
Mtr2g2611 1075 ProSitePatterns Protein kinases ATP-binding region signature. 800 822 IPR017441 GO:0005524
Mtr2g2611 1075 SMART LRR_typ_2 364 388 IPR003591 -
Mtr2g2611 1075 SMART LRR_typ_2 412 435 IPR003591 -
Mtr2g2611 1075 SMART LRR_typ_2 292 315 IPR003591 -
Mtr2g2611 1075 SMART LRR_typ_2 124 148 IPR003591 -
Mtr2g2611 1075 SMART LRR_typ_2 621 644 IPR003591 -
Mtr2g2611 1075 ProSiteProfiles Protein kinase domain profile. 794 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2611 1075 SUPERFAMILY L domain-like 54 330 - -
Mtr2g2611 1075 SMART serkin_6 794 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2611 1075 ProSiteProfiles Leucine-rich repeat profile. 623 645 IPR001611 GO:0005515
Mtr2g2611 1075 Pfam Leucine rich repeat N-terminal domain 56 92 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2611 Mtr-Chr2 39103562 39108169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2611 39 1071 Receptor kinase-like Gene Family AT1G55610 33.506 4.60e-162 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr2g2611 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2611 - - mtr:MTR_2g078810 2073.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2611 2 39103562 39108169 Mtr2g2611 2 39103562 39108169 ECH