Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2606 ATGGTGGGCTCAGGAGCAACATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTTAGAGGTGGTAATGGCTGCAAGGTTGGTGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGAGGAAGAAGTGGTGTTGAAGAAATTGATGGAGAAGATCCTGTGAGAAAAGCTTTCAGCAAAATGTCCATTCAGCTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAACCAACAGAATGTGAACCCAATATCTCTAACTACTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAATGGACTGACCAGTTTGAATCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGACATGGTCTTCTTCAACTTGGTTCATGCAAGATTATTCCTGAAGATCTTCATTTTGTCCTAAGAATGAGACACACATTTGAATCATTAGGTTACCAATCTGGTTTCTACCTCTCACAACTCTTCTCTTCAACAAGGAACACATCCTCATCAACTTCACTTCCTTCAAAACCATCTTCCACCATTCCAATTAGGCCACCTCCACCACTCTTCAACTGGGGTCAGAGACCACTATCTTCTCCTTCCTCAATGCTATCCTCACCCAATTTTCAACAACATGCAGCTAGGCTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTTCTCATGCCTCATGCATCATCACATGAAACTCCAAGAATTGAAGACATGATGGGAGAACATCATGAAAGTGATATTAAATGGCCAAATGGTTTGTCTTTCTTTAATGCTTTAACTGGAAGAGCTGATGATGCTAAACTTTTGTTTAATCCGGATAGCTTAGGAGGAAAACAAGGTGATCATGATCATAATCAACATCATCACACTCTTAATCAAAATCCTAATTCAGATGGTTCGAACCCAAATGAGTTTTTGAGCTTGGATAGTCACCATGAAGGTGGAAGAAAAATGGACAAGTTTAAGAGAAGCTTCACTTTACCTACAAGAGTGGCTTCATCATCTTCATCTACTTCAATGGATCATCATCAACAACAACAAGGTGTGGAGTATAGGAATTCAGAAGGAGGAGGTATGTACTCAGATGTTATGGAGACCTTTATGGAGTAA 1248 0.4151 MVGSGATSDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSGVEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPIRPPPPLFNWGQRPLSSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRIEDMMGEHHESDIKWPNGLSFFNALTGRADDAKLLFNPDSLGGKQGDHDHNQHHHTLNQNPNSDGSNPNEFLSLDSHHEGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQQGVEYRNSEGGGMYSDVMETFME* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2606 415 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 77 IPR025610 -
Mtr2g2606 415 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 86 186 IPR025610 -
Mtr2g2606 415 PANTHER GB|AAF34833.1 1 415 IPR044170 -
Mtr2g2606 415 MobiDBLite consensus disorder prediction 373 398 - -
Mtr2g2606 415 MobiDBLite consensus disorder prediction 355 370 - -
Mtr2g2606 415 MobiDBLite consensus disorder prediction 336 353 - -
Mtr2g2606 415 MobiDBLite consensus disorder prediction 316 407 - -
Mtr2g2606 415 PANTHER GB|AAF34833.1 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2606 Mtr-Chr2 39065770 39068832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2606 21 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.161 1.28e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2606 - - gmx:100814723 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2606 2 39065770 39068832 Mtr2g2606 2 39065770 39068832 ECH