Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2586 ATGAAGAAATCCAATCAAAACCAAATGAACCCTAATTGGGTTCAACTCAAACAAAAGCTGAATCTTAATGGCCCAAAAGCTTCAAGGAACTTCAATGATGATGACGCGCCAAATTCAATATTGGGGAAACGTAAAGGGAGGATTGATGATGATGATTCTGATGATTGTGAGATTAACCCTCTTGCTCCTGTGAATGACGATGCAAGTGTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGGGTTGGTCAAGGAAACAAAAGTGCCCTTGGAAGAGTAACGCTGGTAAACAAGTGGGGCAATGTTATTTATGACGAGTTTGTACGGCCAATGGAGCGGGTTGTTGATTTCCGTACTAAAATTAGCGGCATAAGACCTCGAGATCTGAGAAAAGCAAAGGATTTTTGTACTGCTCAGAAGAAGGTGGCAGAGTTGATCCACGGAAGGATCCTTGTAGGTCATGCCCTGTCCAATGATCTCAAGGCATTGTTATTAAGTCATCCTAAAAAGGATATACGAGATACCTCCGAGTACCCGCCGTTTCTAAGATCAACTGGTAGAGTAGCATTACGGCATCTTGCTTCGGAACATCTTGGTGCTAAGATTCAAACAGGAGAGCATTGCCCGATAGACGATGCCCGCGCTGCTATGATGCTTTACCAAAAAAATAGAAAAGAATGGGAGAAAAGCATAAAAGGTAACTTTCGGAAGCAAAAGAAACGGAAGAAGAATAAAGATGCAAAAGAATGA 753 0.4236 MKKSNQNQMNPNWVQLKQKLNLNGPKASRNFNDDDAPNSILGKRKGRIDDDDSDDCEINPLAPVNDDASVTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTKISGIRPRDLRKAKDFCTAQKKVAELIHGRILVGHALSNDLKALLLSHPKKDIRDTSEYPPFLRSTGRVALRHLASEHLGAKIQTGEHCPIDDARAAMMLYQKNRKEWEKSIKGNFRKQKKRKKNKDAKE* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2586 250 SUPERFAMILY Ribonuclease H-like 73 227 IPR012337 -
Mtr2g2586 250 MobiDBLite consensus disorder prediction 235 250 - -
Mtr2g2586 250 MobiDBLite consensus disorder prediction 19 54 - -
Mtr2g2586 250 Coils Coil 211 231 - -
Mtr2g2586 250 MobiDBLite consensus disorder prediction 19 35 - -
Mtr2g2586 250 SMART exoiiiendus 72 230 IPR013520 -
Mtr2g2586 250 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 47 248 - -
Mtr2g2586 250 MobiDBLite consensus disorder prediction 230 250 - -
Mtr2g2586 250 Pfam Exonuclease 74 221 IPR013520 -
Mtr2g2586 250 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 47 248 IPR034920 -
Mtr2g2586 250 MobiDBLite consensus disorder prediction 38 52 - -
Mtr2g2586 250 Gene3D - 68 248 IPR036397 GO:0003676
Mtr2g2586 250 CDD REX4_like 74 222 IPR037431 GO:0006364|GO:0008408
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2586 73 227 C2H2 Transcription Factor Family AT5G40310 35.673 5.30e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2586 K18327 - gmx:100819122 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2586 2 38846711 38851012 Mtr2g2586 2 38846711 38851012 ECH