Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2581 ATGATTTCAGAAGAAGCATTGGTTCTCATGGATGATGGTAGAGGTCCACACACAAGGAGTACTTTGGCTAGTTCTTATATTGCTCACTCTAATGTAAGACACATTGGTGGGGTTGCTATGAGGGATAACACCTCAGTACTGCCATTTTGTTTCCCTTCACTAAATCAAGTAGGACAACATAACAATATAGGGAGCAGGTTAGGTCAATCTAACCATAACCATTTGATTAATGCAAACAATATGAGGCAATCCTTTCTACCAATACCTTATATACAAGCTCCAAATGCTAATGGAAGTTCATTGCAAAGGTATCACCATGACACAATTGGCAATCTAAATGACACTTTATATTCTAGTCCTCCTCGTCCCACCCTACAACACAATAATTACAACCCTCCAACATTTGCTACTAATGAAGTTCCACCAAATCCTCTACCTGGTGTCGTGATCGCTCCACAGACGGGCCTTCAGATTTTACAACCACATGGAGTCATACCTGAGATAACGCTCAGAAATCGAAGTGTTAACCCCTCCAGCTTCATCTTTATTGATGAAAGTGATTTAATTGATGAAGATGAAAATCTGGTTGATGAACATCAAGATATGCGCTTGGACATTGATAACATGTCTTATGAGGAACTTGTTGCATTGGGTGAGAGGATTGGCAATGTAAGCACTAGTTTACCAGAGAAAACAATTGAAAGTCAACTTAAGACAAAATTATATTCACCTTATGACAGTCAAGAAATCGATGCTTGCATGATATGCCAGGAAGAATTTAAGATTCAAGAGAAGATTGGAATTCTTCAATGCAAGCATGGATATCACGTTGACTGCATAATAAAATGGCTGATGATAAAAAATATTTGCCCTATTTGCAAATTAGAAGCTTTAACGGATGGAGAGAAGAATAAATCCCATGGAATCTATGATTTCTTCATGCATGCATATCATTTTATTCGTGCCTGTTTCCTTCCTGAATAA 984 0.3791 MISEEALVLMDDGRGPHTRSTLASSYIAHSNVRHIGGVAMRDNTSVLPFCFPSLNQVGQHNNIGSRLGQSNHNHLINANNMRQSFLPIPYIQAPNANGSSLQRYHHDTIGNLNDTLYSSPPRPTLQHNNYNPPTFATNEVPPNPLPGVVIAPQTGLQILQPHGVIPEITLRNRSVNPSSFIFIDESDLIDEDENLVDEHQDMRLDIDNMSYEELVALGERIGNVSTSLPEKTIESQLKTKLYSPYDSQEIDACMICQEEFKIQEKIGILQCKHGYHVDCIIKWLMIKNICPICKLEALTDGEKNKSHGIYDFFMHAYHFIRACFLPE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2581 327 SMART ring_2 253 293 IPR001841 -
Mtr2g2581 327 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 302 - -
Mtr2g2581 327 Pfam Ring finger domain 252 294 IPR001841 -
Mtr2g2581 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 301 IPR013083 -
Mtr2g2581 327 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 302 IPR045191 GO:0061630
Mtr2g2581 327 ProSiteProfiles Zinc finger RING-type profile. 253 294 IPR001841 -
Mtr2g2581 327 SUPERFAMILY RING/U-box 236 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2581 Mtr-Chr2 38775423 38776993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2581 194 298 C3H Transcription Factor Family AT2G15530 51.351 6.82e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2581 K19041 - gmx:100800642 227.639