Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2567 ATGAACGGTGGAGAAATAGTGGAAGTTGACGGAGGTCACATTATAAGGTCAAGAGGTCGAAAAGATCGTCATAGTAAAGTTTGCACGGCGAAAGGGCCGAGAGACAGACGCGTTCGTCTCTCGGCCCATACCGCTATTGAATTTTACGATGTTCAAGATCGACTGGGCTTTGATAGGCCCAGTAAAGCACTTGATTGGCTCATTAATAAAGCTAAGCCTGCCATCGATCAACTTGCTCATCTTCCTCCATGGAAACCCACTCTTTTCAAACAGCAACAGCAAAAGCAACAAAACGACGACGTTTCAGAGGAACAGAGTCAAAACGAAAACGAGTTTCGTTTTGTTCAGAATTTTAGCAATAATGGTAACAGCAACAGTTTCATTCCGTTTCAAAATGAAATACCTGAAACGGCGTCGTTTAGGAATGATTTGAAGCTTTCGCTTCAACAGAATCAGAATCAACACGTGCAACAGCACGTGCTTTTCACCGGGAATTTTGATGGAATGGTGACGTGGAATTCCGGTGGTGGTGCTACTACTATTGATACTGGTAGTGGTGGCGGTGGTGGTGATGGTTTTGTGTTTCATGGTTCTTCGCCGTCGCCGGTTGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCACAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGTTAGATGCGCCGGCGACATTTGTTGCGGCTGATTATCGACTTCAAGCGGGTGGTTCGGGTGCCGGATTTGCTTCTGGTGGCTTTTCTGGTTTTCGTGTGCCGGCACGAATTGGAGGTGATGATGAGGAGATGCATGGCGGTTTATCTGACAGGCTGTCGTCTGCGTCCTCAGATTCTCGCCGTTGA 885 0.4723 MNGGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLAHLPPWKPTLFKQQQQKQQNDDVSEEQSQNENEFRFVQNFSNNGNSNSFIPFQNEIPETASFRNDLKLSLQQNQNQHVQQHVLFTGNFDGMVTWNSGGGATTIDTGSGGGGGDGFVFHGSSPSPVVFPAVMYGQNQYLSQRGPLQSSYNPSVRAWLDAPATFVAADYRLQAGGSGAGFASGGFSGFRVPARIGGDDEEMHGGLSDRLSSASSDSRR* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2567 294 MobiDBLite consensus disorder prediction 89 108 - -
Mtr2g2567 294 ProSiteProfiles TCP domain profile. 20 78 IPR017887 -
Mtr2g2567 294 PANTHER TRANSCRIPTION FACTOR TCP4 150 293 - -
Mtr2g2567 294 PANTHER TRANSCRIPTION FACTOR TCP4 2 154 - -
Mtr2g2567 294 MobiDBLite consensus disorder prediction 1 27 - -
Mtr2g2567 294 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 150 293 IPR005333 GO:0003700
Mtr2g2567 294 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 154 IPR005333 GO:0003700
Mtr2g2567 294 Pfam TCP family transcription factor 19 134 IPR017887 -
Mtr2g2567 294 MobiDBLite consensus disorder prediction 272 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2567 Mtr-Chr2 38602011 38603826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2567 4 293 TCP Transcription Factor Family AT1G53230 41.509 1.62e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr2g2567 TCP 4.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2567 - - cam:101504111 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2567 2 38602011 38603826 Mtr8g1665 8 24588897 24591751 ECH
Mtr2g3146 2 45179990 45182626 Mtr2g2567 2 38602011 38603826 ECH
Mtr4g2516 4 38723031 38725034 Mtr2g2567 2 38602011 38603826 ECH
Mtr2g2567 2 38602011 38603826 Mtr2g2567 2 38602011 38603826 ECH