Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2566 ATGATAAACAACGGAGTACACAGTCTCCGCACGTGCCTCCGCCTCCCGGAACATCCAATTTTCCGAGCAACTCCGCTCTCTTACAATTTCCGGCGCCGGTTTTTCGTCACCGCATCATTAACGGAGAAGAAGAAAGAGAAGGTTATAGTTATTTCTGGACCCACCGGTTCCGGTAAGAGCCGTCTCGCAATGGAACTTGCTAAAAGCATCAATGGTGAAATCGTTAGTGCCGATTCTGTTCAGGTATACAAGGGTCTTGATGTTGGATCTGCAAAGCCTTCATTAAATGATAGAAAGGAAGTGCCGCATCATCTGGTTGACATACTTCATCCATCTGAAGATTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGAAAGCGACAAGATCTATTCTTGACAACGGCCGTGTTCCGATTGTTGTTGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGACGTGCCTAAAGCCTCCGCAGAGATAACATCTCAAGCTTGTATGGAGTTAGCTGAATTACAGAGAAATGACGACTGGGAAGCTGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAAGGTCCAACATATAGCAGTGAATGATTGGTACCGATTACGGCGTAGTCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGGTGATTATAGAGTTGCTGATGGTTCTGATTCATCTGATATGAACACTAATTATGATGCAATGAAAGAAACCAATTCAGCAAAGTTAGACTATGATTTTATGTGTTTTTTCCTTTCTAGCGACAGACTTGACCTCTACAAATCAATTGATTATCGGTGTGAAGATATGATATTAGGAGGGGATGGCCTTTTGTCCGAGGCTCAATGGCTTATTGATATCGGTCTTCATCCAAACTCCAACTCTCCTACAAAAGCAATTGGTTACAGACAAGCCATGGATTACTTAATAGGATGCAGAGAACAAGGGGGTCAGAGTTCAGCTGGAGAATTTTACAGATTCTTGTCTGAATTTCAAAAAGCTTCAAGGAATTTCGCGAAACGACAGTTGACTTGGTTTCGTAATGAACGAATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAACCGTTCTGAACTTTATTCATGATGCATACCACAATCAGAATGGAAATCTTTTTGTGCCCGAACACCTTAGAATGTCGAGAGATATTACTAATCCTCGAATAGCTGCTAAACTAAAGGCTTACCGCACCAGAAATAGGCATTTTGTGAACGGGGAAGATTGTTATCCTATTTTGGAATGGATACAGAAGACTCAGAAGTGA 1350 0.4237 MINNGVHSLRTCLRLPEHPIFRATPLSYNFRRRFFVTASLTEKKKEKVIVISGPTGSGKSRLAMELAKSINGEIVSADSVQVYKGLDVGSAKPSLNDRKEVPHHLVDILHPSEDYSVGQFFEDARKATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASAEITSQACMELAELQRNDDWEAAVQLVVKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGDYRVADGSDSSDMNTNYDAMKETNSAKLDYDFMCFFLSSDRLDLYKSIDYRCEDMILGGDGLLSEAQWLIDIGLHPNSNSPTKAIGYRQAMDYLIGCREQGGQSSAGEFYRFLSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYHNQNGNLFVPEHLRMSRDITNPRIAAKLKAYRTRNRHFVNGEDCYPILEWIQKTQK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2566 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 287 IPR027417 -
Mtr2g2566 449 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 38 448 - -
Mtr2g2566 449 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 448 IPR039657 -
Mtr2g2566 449 Pfam IPP transferase 81 370 - -
Mtr2g2566 449 Gene3D - 45 421 IPR027417 -
Mtr2g2566 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 181 IPR027417 -
Mtr2g2566 449 Gene3D - 156 227 - -
Mtr2g2566 449 TIGRFAM miaA: tRNA dimethylallyltransferase 48 225 IPR018022 GO:0008033
Mtr2g2566 449 Hamap tRNA dimethylallyltransferase [miaA]. 48 387 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2566 Mtr-Chr2 38524633 38531846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2566 51 330 C2H2 Transcription Factor Family AT2G27760 26.667 3.29e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2566 K00791 - gmx:100808814 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2566 2 38524633 38531846 Mtr2g2566 2 38524633 38531846 ECH