Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2563 ATGTATGCTTCACATAACTTAGGCAATACATGCCTCTCTTCTCTCACTTTGCATGAAACAAACACAAGAATGGAATCATCATTCAATCCCATCTCATGCAACAGAAAACCCCTTTATAGGTTAGAAACCAAAAATGTATCATACAAATTGTGCAGCCAACTTGATGAACTTAGAACTCTTTGTTTCGGTTCGAATCCTAGGAGAGGTTCAAAGTTCATTTTGAAGGATGTAAATTGTGAGGCAAGGCCAGGGGAGGTTACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACAACACTGCTTGAAATTCTTGCTGGGAGAATACCCTCTTGTAAGGTTTCTGGACAAGTAATTGTCAATCAGAAGCAGATGGATGTGAACAGATTCAGAAGAGACTCGGGGCACGTAACACAAGAAGATGCATTGTTTCCATCGCTTACGGTTAGAGAGACACTCATGTATAGTGCTTTGTTGAGGCTTCCCGGAGGGCGAAAAGTGGCTGCTATGAGAGTTGCAGAGTTGATGAAGGAGCTCGGGTTGGATTCTATTGCAGATTCAAGAATTGGCAATGGATCAGACCATGGTATATCAGGCGGGGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTGGTTCATGACCCTGCAATTATTTTGATTGATGAACCAACTTCAGGTCTGGATTCAGCATCAGCTCTTAATGTAATCTCATTGCTAAGACTAATGGCATTTAATCAAGGTAAGACAGTTGTTTTAACTATCCACCAACCCGGTTTCCGAATCTTAGAGCAACTTGATAGCCTCATTTTGCTATCTGATGGATTTGTCATGCATAATGGTTCATTGAATCTTCTTGAGGCAAGGCTCACTTTATCTGGTCATCGCATTCCCAACCATGTCAATGTCTTAGAATTTGCTCTTGATGTCATGCAAAGCTTAGTTATACATACTTCAGAACCTGGGAACAATCAATTTCTTCTCAATGATGACAAAGGGCACCAAGATCACAAGATGATGATGCAGTGCTCTATGATTGTCAAAGAAAAGGCAATATTGTACTCAAATTCTCCAATGGAGGAAATTTTAATCCTAGGACAAAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGTCACAAGGGTCATACAGGCCTTAGTAGCTGGATTTATATTGGGAACCATATTCTTGAATGTTGGGAACAAACAAAGTAAGGTAGCGTTACAAACACGAAGCGGCTTCTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGGCTGCCTATTTTCTTGGAGGAGAGAAGAACTTTTATGAGAGAGACCGCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACGCTTGTGTTTCTTCCTTTTCTTCTAATGGTTGGTCTTCTGTATACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATTGGCGGTTTCCTTTACTTCTCTTTAGTGGTTTGGTTGGTCCTATTAATGTCGAATTCTCTTGTGGCTTGTTTTAGCGCCCTAGTTCCAAATTTCATCCTTGGAAGCTCGGTGATTGCTGGTCTAATGGGGTCTTTCTTTCTATTCTCAGGGTATTTCATATCAAAGGAAAAAATACCTAGTTACTGGATTTTTATGCACTATATAAGCCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGTGAGCAAGGGAAATCGAGATGCATAGAAGTTGATAACGGGGAATGCATTTTATATGGAGTTGAGTTTTTAAGACAACAGGGTCTCAAAGAGTCGCACAAATGGACAAATTTGGCTGTAATGTTAAGCTTTATAATAGGGTATAGAATGCTTAACTTTATAATTCTTTGGTCTAGATGTTATAAAAGCAGAAAATAA 1911 0.3956 MYASHNLGNTCLSSLTLHETNTRMESSFNPISCNRKPLYRLETKNVSYKLCSQLDELRTLCFGSNPRRGSKFILKDVNCEARPGEVTAIAGPSGAGKTTLLEILAGRIPSCKVSGQVIVNQKQMDVNRFRRDSGHVTQEDALFPSLTVRETLMYSALLRLPGGRKVAAMRVAELMKELGLDSIADSRIGNGSDHGISGGERRRVSIGVDLVHDPAIILIDEPTSGLDSASALNVISLLRLMAFNQGKTVVLTIHQPGFRILEQLDSLILLSDGFVMHNGSLNLLEARLTLSGHRIPNHVNVLEFALDVMQSLVIHTSEPGNNQFLLNDDKGHQDHKMMMQCSMIVKEKAILYSNSPMEEILILGQRFCSNIFRTKQLFVTRVIQALVAGFILGTIFLNVGNKQSKVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETARGAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDIGGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYISLFKYPFECLMINEYGGEQGKSRCIEVDNGECILYGVEFLRQQGLKESHKWTNLAVMLSFIIGYRMLNFIILWSRCYKSRK* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2563 636 CDD ABCG_EPDR 64 279 - -
Mtr2g2563 636 Pfam ABC-2 type transporter 359 570 IPR013525 GO:0016020|GO:0140359
Mtr2g2563 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 284 IPR027417 -
Mtr2g2563 636 SMART AAA_5 83 280 IPR003593 -
Mtr2g2563 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 628 - -
Mtr2g2563 636 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524
Mtr2g2563 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 25 628 - -
Mtr2g2563 636 Pfam ABC transporter 74 224 IPR003439 GO:0005524
Mtr2g2563 636 Gene3D - 56 293 IPR027417 -
Mtr2g2563 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 297 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2563 Mtr-Chr2 38508395 38510537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2563 34 284 Calmodulin-binding Proteins AT2G36910 28.185 8.01e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2563 K05681 - gmx:100776372 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2563 2 38508395 38510537 Mtr2g2563 2 38508395 38510537 ECH