Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2557 ATGTCACATTCACCAGAAAAACCCGAACCAGAAAAGCCTGAACCGGAGTTAGACCAATTTTCCGATCGGTTTCGTCAAACTGTCACTTTAGAAGCTAACAAACCGGATTTCCGTGAACTCGATCTGGGTTCACCTGTTTCACCATTGAGGACACGTGGCGGACCGTCGGTAAGTAGTAGTTCAGGTTCTTCTGGATCTTTCTCCGGTGGTGGTGGTGGTAGAATCGGGTCTAACCCAGTTTCCAAAAGATCCGATTCAGCTCCGAGTAAAGATAATAATAACTCCGGTGAACTTTCTGGTTCGAGTGAAAACTCTCCGACTGCGGATAGATCTACTGGGAATGTGAGAGGAACGAAACCGGGTCATACGAGATCCAATTCAGGATCCGGGTTGTTACATTCGGGTCAAACGGTGAACTCTCCGCCGTTGAATGTTCTTCCTACAGGAAACATTTGTCCTTCCGGGAGGATCTTGAAAACTGGTATGGCGGCGAATCGGAGTTCGAGAAGTGATGTTCTTGGTTCTGGAACTGGGAACTATGGTCATGGTAGTATAATGCGTGGTGGTGGTGTTGGAGTTGTTACCGGGAAGGTGGAGAGTAACAGTATGAGAAGTGGCATTGGAGGTGATTTAGGAAAAAGGGGGGTGCAGAGTGTGGATCCAGAAGAGTTGAAGAAAGCTGGGAATGAGCATTACAAAAAGGGTCATTTTTCAGATGCATTGAGTCTTTATGACCGTGCAATTTCGATGTCGCCGGGGAGTGCTTCTTACCGGAGCAACCGCGCCGCGGCGCTGACCGGTTTAGGAAGACTAGCTGAGGCTGTTAAGGAATGTGAAGAGGCTGTTAGGTTGGATCCTAATTATTCTAGAGCTCATTATCGTTTAGCTTCTCTTTTCATCAGGTTAGGACAAGTTGAGAATGCTAGGAAGCACCTTTGTCATCCGGGATTAACACCGGATCCGACCGAGATGCAGAAGTTGAAAATGGTGGAAAAGCATATTAATAAATGTGCAGATGTTAGGAGAGTAGGAGATTGGAAAAGTGTTCTGAGGGAACTTGATGCTTCTGTTGCTGCCGGAGCTGATTCTTCTCCTCAGCTCTTTATGTGTAGAGCAGAAGCCCTCTTGAAACTACATCAAATTGATGATGCAGAATCAGTTTTGTTACATGTTCCGAAATCGGAGCCACGTGGTAATAGTAATAATACATCTTCTCAAGCAAGATTTTTTGGGATGATTTCGGAAGCATATTCCTACTTTGTCAAAGCTCAAATTGAGATGGCATTGGGAAGGTTTCAGAATGCAGTCACAGCTGCTGAGAAGGCGAGTCAAATTGATTCCCGAAATCTTGAAGTTGCTGTTTTGGTTAACAATGTAAGGATGGTGGCAAGAGCTCGAGTTCGTGGCAATGATCTTTTTAAATCTGAACGGTTCACTGAAGCTTGTTCGGCATACGGGGAAGGTTTGAGATTAGACCCTTCTAATTCTGTTCTATATTGCAATAGAGCAGCGTGTTGGTTTAAGCTTGGTCAATGGGAAAAATCAATCGAAGACTCTAATCAAGCTCTACGTATCCAGCCAAATTATACAAAAGCTCTTCTTCGAAGGGCTACATCAAACAGCAAGCTGGAGAGGTGGGAAGAAGCAGTAAAAGATTACGAGGTCTTACGGAAAGAACTTCCAAATGACAATGAAGTTGCTGAAGCTCTTTTTCATGCACAAGTTGCACTAAAGAAATCTCGTGGAGAAGAAGTATATAATTTAAAATTTGGTGGTGAAGTGGAACAAGTATCGGGTCTTGAGCAGTTTAGATCTGCAATATCTTTACCAGGTGTTTCTGTTGTCCATTTTGAAGTTGCTTCTAACTCACAATGTAAGCAAATATCACCATTTTTGGATACACTATGTGGTCGGTATCCATCTATTAACTTCCTCAAGGTGGATATTCAAGAAAATCCGACAGTTGCAACTGCTGAGAATGTTAGAGTCGTACCAACTTTCAAGATATACAAAAACGGAAGCAGAGTGAAGGAAATCATATGCCCTAGTCGTGACATGTTGGAACACTCAGTGAGGCATTACAGCATTTAG 2091 0.4366 MSHSPEKPEPEKPEPELDQFSDRFRQTVTLEANKPDFRELDLGSPVSPLRTRGGPSVSSSSGSSGSFSGGGGGRIGSNPVSKRSDSAPSKDNNNSGELSGSSENSPTADRSTGNVRGTKPGHTRSNSGSGLLHSGQTVNSPPLNVLPTGNICPSGRILKTGMAANRSSRSDVLGSGTGNYGHGSIMRGGGVGVVTGKVESNSMRSGIGGDLGKRGVQSVDPEELKKAGNEHYKKGHFSDALSLYDRAISMSPGSASYRSNRAAALTGLGRLAEAVKECEEAVRLDPNYSRAHYRLASLFIRLGQVENARKHLCHPGLTPDPTEMQKLKMVEKHINKCADVRRVGDWKSVLRELDASVAAGADSSPQLFMCRAEALLKLHQIDDAESVLLHVPKSEPRGNSNNTSSQARFFGMISEAYSYFVKAQIEMALGRFQNAVTAAEKASQIDSRNLEVAVLVNNVRMVARARVRGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGQWEKSIEDSNQALRIQPNYTKALLRRATSNSKLERWEEAVKDYEVLRKELPNDNEVAEALFHAQVALKKSRGEEVYNLKFGGEVEQVSGLEQFRSAISLPGVSVVHFEVASNSQCKQISPFLDTLCGRYPSINFLKVDIQENPTVATAENVRVVPTFKIYKNGSRVKEIICPSRDMLEHSVRHYSI* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2557 696 MobiDBLite consensus disorder prediction 51 71 - -
Mtr2g2557 696 SUPERFAMILY Thioredoxin-like 499 694 IPR036249 -
Mtr2g2557 696 SMART tpr_5 496 529 IPR019734 GO:0005515
Mtr2g2557 696 SMART tpr_5 462 495 IPR019734 GO:0005515
Mtr2g2557 696 SMART tpr_5 221 254 IPR019734 GO:0005515
Mtr2g2557 696 SMART tpr_5 416 449 IPR019734 GO:0005515
Mtr2g2557 696 SMART tpr_5 530 563 IPR019734 GO:0005515
Mtr2g2557 696 SMART tpr_5 255 288 IPR019734 GO:0005515
Mtr2g2557 696 MobiDBLite consensus disorder prediction 79 146 - -
Mtr2g2557 696 Pfam Tetratricopeptide repeat 532 562 IPR019734 GO:0005515
Mtr2g2557 696 Pfam Tetratricopeptide repeat 227 288 - -
Mtr2g2557 696 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 21 694 - -
Mtr2g2557 696 CDD TRX_family 601 688 - -
Mtr2g2557 696 Pfam Tetratricopeptide repeat 417 447 IPR019734 GO:0005515
Mtr2g2557 696 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 694 IPR044534 -
Mtr2g2557 696 MobiDBLite consensus disorder prediction 1 146 - -
Mtr2g2557 696 Pfam Thioredoxin 601 684 IPR013766 -
Mtr2g2557 696 MobiDBLite consensus disorder prediction 1 21 - -
Mtr2g2557 696 Gene3D Tetratricopeptide repeat domain 219 582 IPR011990 GO:0005515
Mtr2g2557 696 Gene3D Glutaredoxin 589 695 - -
Mtr2g2557 696 SUPERFAMILY TPR-like 221 451 IPR011990 GO:0005515
Mtr2g2557 696 ProSiteProfiles TPR repeat profile. 496 529 IPR019734 GO:0005515
Mtr2g2557 696 ProSiteProfiles TPR repeat profile. 221 254 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2557 Mtr-Chr2 38423464 38427459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2557 461 606 U-box Gene Family AT3G07370 29.508 3.81e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2557 - - adu:107459775 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2557 2 38423464 38427459 Mtr2g2557 2 38423464 38427459 ECH