Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2531 ATGACAGTGATCTCAACAATGTTTGATAGCAGCAAGCCAGTTTTATCTGCAGTGGCCTCAATTGCGCTAATGCGAACTGTCACGAATGAACTCATTCCTCGTGAAGTCCTAAACTTTGTTCAATCGGGACTTCACCATGTTTTTCGCCAATTCAACGCACAATTCACCATAGTCATTGAAGAATTTCAAGGGATGACAAGAAACCAAGTTTTTGAGGCAGCAGAAGCCTATCTAGGAACTAAAGCAACTGTCTCAGCAGAAAGAGTTAAAGCAACCAAATCTATGGAACATAAAAAGCTCTCATTCAATCTAGATAGAGATGAAGAAGTGAGTGATGTTTTTGAAGGTGTTAGTGTAAAGTGGAAACTAATATGCATACAAGTCGACTCATCAAGAGTTCGACATTTTGATAGGGGCTCCTCGCCTGTGTCAGAAATAAGATCATATGAGCTAACTTTTCACAAGAAACACAAAAACAAGATCATTGATTCATATTTGCCTTATGTGATGGAGATAGCTAAACAAATTAAACAAGGAATTGTGACACTTAAGATTCACTCAAATGAATATAATCGTTGGTGTCATGATCCTATTAAGTTCAACCATCCAATGAGTTTCACCACTCTTGCAATTGATGAAGAGCTTCAAAGGGAAATTAAGAATGATTTGGACAAATTTGTGAGGGCTAAAGAATTTTATAGAAGAACAGGGAAAGCTTGGAAACGCGGTTACTTGTTGTATGGCCCTCCTGGTACTGGAAAGTCTAGCTTGATTGCAGCCATGGCTAACTATCTCAACTATGATATCTATGACTTGGATCTCACTAATGTAGGGGATAATAAGAGCTTGAAGCAACTTATTCTCAGCATGTCCAACCGTTCTATACTTGTGATAGAGGATATTGATTGCTCCGTAAAATTGCAAAACCGAGAAGAAGATGAAGAAGTTGTTCATAATGGCCACAATAATGTAATGACACTTTCAGGACTATTGAATGCAGTAGATGGTCTTTGGTCATGCTGTGGAGAAGAACACATAATTGTTTTCACAACAAATCACAAAGACAGACTTGATCCTGCTCTGCTAAGGCCTGGTAGAATGGACAAGCAAATTCACTTGTCATATTGCAACTTTTCTGCTTTTAAGCAATTGGTTGTTAACTACCTTTGTATTACTGAACATGAACTCTTTGAAAAGATTGAAGTTCTTTTAGGAGAAGTTCAAGTTACTCCAGCTGAAATTGCAGAAGTGTTAACAAAGGATGTTGATGCTACAGAATGCTTACAAGACCTTATCAAATTCCTCCAAGCCAAGAAAATGGTCCAGGAAGAGAGTAAGAGAGAAGAAAATAGCAAAGAAGAACAAGATCTAGGTATATAA 1380 0.3768 MTVISTMFDSSKPVLSAVASIALMRTVTNELIPREVLNFVQSGLHHVFRQFNAQFTIVIEEFQGMTRNQVFEAAEAYLGTKATVSAERVKATKSMEHKKLSFNLDRDEEVSDVFEGVSVKWKLICIQVDSSRVRHFDRGSSPVSEIRSYELTFHKKHKNKIIDSYLPYVMEIAKQIKQGIVTLKIHSNEYNRWCHDPIKFNHPMSFTTLAIDEELQREIKNDLDKFVRAKEFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTNVGDNKSLKQLILSMSNRSILVIEDIDCSVKLQNREEDEEVVHNGHNNVMTLSGLLNAVDGLWSCCGEEHIIVFTTNHKDRLDPALLRPGRMDKQIHLSYCNFSAFKQLVVNYLCITEHELFEKIEVLLGEVQVTPAEIAEVLTKDVDATECLQDLIKFLQAKKMVQEESKREENSKEEQDLGI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2531 459 CDD AAA 241 375 - -
Mtr2g2531 459 SMART AAA_5 240 377 IPR003593 -
Mtr2g2531 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 419 IPR027417 -
Mtr2g2531 459 Gene3D - 197 371 IPR027417 -
Mtr2g2531 459 Gene3D - 372 441 - -
Mtr2g2531 459 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Mtr2g2531 459 Pfam ATPase family associated with various cellular activities (AAA) 245 374 IPR003959 GO:0005524|GO:0016887
Mtr2g2531 459 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 5 450 - -
Mtr2g2531 459 PANTHER BCS1 AAA-TYPE ATPASE 5 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2531 Mtr-Chr2 38127392 38129278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2531 216 377 Calmodulin-binding Proteins AT3G56690 29.310 5.66e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2531 K08900 - gmx:100778503 574.704