Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2520 ATGTCACTGTCTGGTCATCTCCAACACAACAACACTCACATTGAACTCTCAAAATCAACCATGTCCAACAAATTGTTTTTCTCCCATAATCTTGTTTTAGGTGTCATCACAACTAAATCAACAACCTTAAAATTCAACAACCACTTCTCATTCCCATTTTCACTCAAATGCAGCAGCATCACAACATCTCAATCAGAATCAATCACACAACCTTTTGCTGTATCTTATCTTATCAACAATTTTGATTTCTCAACTGAATCAGCTCTCAAAGCTTTCAACCTCAAGCAGGTTCGTTTCAATACCTCAGATAATCCTGATTCTGTTATCACCTTCTTTCAAAACCATGGTTTTTCAAACTCTGACATACGCATCTTCATCAAAAAAGCACCATGGTTACTTTCATCACAACCCCACAAAAGGTTTTCGAAAACCAACAAGGATACTATTGTTTACTTAATTCGACATTCAAGGTCGTTTATTGTTTATCCCCTTAACCTTCTAGAGGCTAATATCAATTTGATGGTTGATTTTGGAGTTTATGATTCTGCCATTGCTAGATTGCTTCGAACTAGGAAATCTATATCTTGTTCAAATGATTTGATTAAGTCATTGGAGGACGTTAAGGGTTTAGGGTTTGACCCTTCAACGATCGCATTTGGGACTGCTTTGGTGACCAAGCAATGTATGAGTAACATACTTTGGGATAAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGTATTTAGGAGTCAGCCTAGTTTGATGTTGACTTCAATTGATAAGATTAATCTGTTGATCAGTTTTTGGGTTAATCAAATGGGTTGGGATCCCTTGGCACTTACTAAATCTCCACTTATGTTTTCTTTTAGTTTACATAAAAGGATCATTCCAAGAGCCTCGGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAAAGAAGAAGGCGAGCTTAGTTAGACCATTTGCTTATTCCGAGGATATGTTCTTGAACAAGCGTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTTTTGAAGCTATATTACGAAAAAATGAAACTTGCAAATGCAATGGAGAACAATGGGATGCCATCCACCAAATGTGTAATGTATTGA 1134 0.366 MSLSGHLQHNNTHIELSKSTMSNKLFFSHNLVLGVITTKSTTLKFNNHFSFPFSLKCSSITTSQSESITQPFAVSYLINNFDFSTESALKAFNLKQVRFNTSDNPDSVITFFQNHGFSNSDIRIFIKKAPWLLSSQPHKRFSKTNKDTIVYLIRHSRSFIVYPLNLLEANINLMVDFGVYDSAIARLLRTRKSISCSNDLIKSLEDVKGLGFDPSTIAFGTALVTKQCMSNILWDKKVDVFKKWGWSDEDVIRVFRSQPSLMLTSIDKINLLISFWVNQMGWDPLALTKSPLMFSFSLHKRIIPRASVLQFLLMKGLRKKKASLVRPFAYSEDMFLNKRVFSFKEESDYLLKLYYEKMKLANAMENNGMPSTKCVMY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2520 377 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 41 140 - -
Mtr2g2520 377 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 140 363 - -
Mtr2g2520 377 SMART mt_12 284 318 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 SMART mt_12 252 283 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 SMART mt_12 123 158 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 Pfam mTERF 235 335 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 PANTHER CGI-12 PROTEIN-RELATED 140 363 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 PANTHER CGI-12 PROTEIN-RELATED 41 140 IPR003690 GO:0003690|GO:0006355
Mtr2g2520 377 Gene3D Transcription termination factor 3, mitochondrial 80 352 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2520 Mtr-Chr2 37985884 37987441 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g2520 mTERF 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2520 K15032 - gmx:102663414 258.84