Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2496 ATGGAGAATCAGCTTTTGCTTCCTACAAATTACGGTAAAAAGGCAATGGAAGAAGAGCTAATAAGAGGACGTGACATGGCAAATCAATTACTTGAAGTATTAACTTTTGATGATAAGTCAAATATTAGAGAAGTTAAAGGGTCAAATATTGTTGCTGAAGATCTTGTGCTTGAGGTGCTCAAATCATTGACAAATACACTTTTGATGTTGAACAATGGCAAAGAGTCCAATGATATGGCTGTTCCTACAACTCCTACAACTATCAGAGATTTTTCTTTTTCATCCAATTGCCCAAAGATGGAGGAGGATTTGGACAGAGGTTACAAGAAATTCGAAACTCTCAACACCAAAAATCCAAAAGGGTCGAACAAGAGAAAGTCAAGTGCACCAACTTGGGAAAAGACGGCATCAATATTGATCGATGATGGTCATACATGGAGAAAGTACGGACAAAAAATGTTAACAAATGCCAAATATTTCAGGAATTACTATAGGTGCGCTCACATGTACGATCAACATTGTGAAGCAATCAAACATGTTCAAAGAATTCAAGAGAACCCTCCTTTGTACCGGACTACATATTATGACCATCACACTTGCAAAAGCTCTTACCATTCAGACATAAAATTGGAATCCATTTTGTGCTACGATGACTCTTCTATATTACTTAGTTTCGATAACAACATTTCAAGTGAACAAGAATTTCCATTTCGACCGCGACCACCATCGCCACAATTGCCACTTCTTGCATCTACAAAAGAGGAACCCAAGGAAGAGATCCACAATGATCGTTTTCCTCGAGACCAATTGCTCCCATCAGAGAACCTCCAGTTATGCGATTTTGATGTGTATTTCGATTATTTAAGAGATGTTAGTGAGTTATCATCGATCGAATCTTTTTAA 903 0.3754 MENQLLLPTNYGKKAMEEELIRGRDMANQLLEVLTFDDKSNIREVKGSNIVAEDLVLEVLKSLTNTLLMLNNGKESNDMAVPTTPTTIRDFSFSSNCPKMEEDLDRGYKKFETLNTKNPKGSNKRKSSAPTWEKTASILIDDGHTWRKYGQKMLTNAKYFRNYYRCAHMYDQHCEAIKHVQRIQENPPLYRTTYYDHHTCKSSYHSDIKLESILCYDDSSILLSFDNNISSEQEFPFRPRPPSPQLPLLASTKEEPKEEIHNDRFPRDQLLPSENLQLCDFDVYFDYLRDVSELSSIESF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2496 300 SUPERFAMILY WRKY DNA-binding domain 137 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g2496 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 299 IPR044810 GO:0003700
Mtr2g2496 300 ProSiteProfiles WRKY domain profile. 135 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g2496 300 Gene3D WRKY domain 126 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g2496 300 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 299 - -
Mtr2g2496 300 SMART WRKY_cls 140 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g2496 300 Pfam WRKY DNA -binding domain 141 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2496 Mtr-Chr2 37671397 37674178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2496 13 201 WRKY Transcription Factor Family AT5G01900 32.105 1.03e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g2496 WRKY 8.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2496 - - gmx:100792193 276.559