Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2482 ATGGCTTTCACTACCTCAACCCTAGCTGAAAAGAAGAACAAGGTTTTGTTCATATTGGGTGCAACAGGAACTGGAAAAACTAAACTTTCCATCAACTTGAGTACTTATTACCCCGCTGAAATCATCAACTCAGACAAGATTCAAGTCTATAAGGGTCTTGATATTGTCACAAATAAGGTACTGGAATCTGAACGTTGCTCGATTCCGCATCATATATTAGGCATCATCGATGATCCTGAATATGATTTTACTATGAATGATTTCTGCAAGCATGTGCTTGAATCCTTAGATCTAATAATTGGCAATGGACACCTACCTATTATTGTAGGAGGGTCCAATTCTTATCTAAGAAAATTAGTTGAGGACCCAACCATTGCATTTCTTTCAAAATATGATTGTTGTTTCATCTGGGTAGATGTGTCTTTGCCTACTCTGTTTAAATATGTAGGCAAAAGAGTGGATGAAATGGTTGAGGGTGGGATGGTTGATGAGATTCGAGAATATTTTGTACCTGGGGCAGACAACACAAAGGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTGATTCTTTTTTCGCGATAGAAAAGAAAAGTGGCATTGATGATGCTATAAAGGAAATGATACTTAAGAAAGCTATTGAAGAAACCAAACAAAACACTTGCATACTGGCTAAAAATCAACTCTCGAAGATCCAGAACATGACTCATATGCTTGAATCGATGGTGTATAAAATTGATTCTACGGAAGTCTTTGAGGCCCTTTTAAGGGGAGAAGATTATAAACATTTGCATCAAGAGATTGTGATTAAACCAAGCAAGGAGATAGTGAAGAGATTCCTAGAGGAGACGACTGATGAATTTGGATATGAAAAATATTCAAATGATAATGTGAAACATGCATCCAATGGGGAGGAATCCGCGCTTCTGGAGGATGAGGTGACGGAGCTTCATGAGTTATCTACGAGTTTGCACTCAATAGCTCGTGTGCTGTATGAGTTTGCAGAAGGCGAGGATGAACTGGATCATATTCATGGTAAATGGAAGTGGTTGAGATATGCTATCCATGGCTATTTTGGGTGTGGGGAGTATCAATTTCTCACGGCCGCGGATGAGCCTCTAGATAGGGGTTTCGTTGATGATATTTGGCACAAGCAAGTTCCTTTAAAGGTTTCCTTAAACGAGTGGCGCCTTCTCCTTAATAGAATCCCAACCAAAGACAACATGGTGCGACGACATGTTCTTCAACCAGACGACGACATGTGTATGGGAGGATGTGGCTCAATGGATACGACGTATCATCTTTTCTTAGGCTGTGATACCTTTGGCAGCGTTTGGTCCCTTGTCTGGCAGTGA 1353 0.405 MAFTTSTLAEKKNKVLFILGATGTGKTKLSINLSTYYPAEIINSDKIQVYKGLDIVTNKVLESERCSIPHHILGIIDDPEYDFTMNDFCKHVLESLDLIIGNGHLPIIVGGSNSYLRKLVEDPTIAFLSKYDCCFIWVDVSLPTLFKYVGKRVDEMVEGGMVDEIREYFVPGADNTKGIRRAIGVPELDSFFAIEKKSGIDDAIKEMILKKAIEETKQNTCILAKNQLSKIQNMTHMLESMVYKIDSTEVFEALLRGEDYKHLHQEIVIKPSKEIVKRFLEETTDEFGYEKYSNDNVKHASNGEESALLEDEVTELHELSTSLHSIARVLYEFAEGEDELDHIHGKWKWLRYAIHGYFGCGEYQFLTAADEPLDRGFVDDIWHKQVPLKVSLNEWRLLLNRIPTKDNMVRRHVLQPDDDMCMGGCGSMDTTYHLFLGCDTFGSVWSLVWQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2482 450 Gene3D - 12 280 IPR027417 -
Mtr2g2482 450 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 294 - -
Mtr2g2482 450 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 294 IPR039657 -
Mtr2g2482 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 172 IPR027417 -
Mtr2g2482 450 Pfam IPP transferase 48 122 - -
Mtr2g2482 450 Pfam IPP transferase 130 229 - -
Mtr2g2482 450 Pfam zinc-binding in reverse transcriptase 378 445 IPR026960 -
Mtr2g2482 450 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2482 Mtr-Chr2 37414695 37417776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2482 54 285 C2H2 Transcription Factor Family AT2G27760 27.626 1.91e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2482 K10760 - gmx:121173984 397.897