Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2478 ATGGCTAGATCCACTCAATTTTTCTTCCTTTCATTCATTCTCATTTGGTCCATATCTCTAACAGCTTTTGGAGCTACTACTATTCACCCTGATGAAAAGAAAGCTCTTGAAGTTATAGCTAAATCACTTGGTAAGAATGATTGGAACTTCGACATTGATCCATGTAGCAACCAACCTAACTGGGCTACACCGAAGCCTGCGCATCCCAGTCCCAGATTGAATATCGTAGAGAACAATGTCACTTGCAACTGCAGTATTTCTGCTGACAACTTCTGCCATGTTGTTGAAATAACTTTGAAAGGGCAAAATCTCCCCGGCACTCTGCCACCAGAACTGAACAGGTTGCGATACCTTCAAATTATTGACTTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGATGAATATCCGTAACATTAGTCTCCCCAGCAATCGATTAACGGGTTCAATACCAGTGGAGATTGCAAATATATCTACTCTGATACAGTTGGATTTAACGGCCAATCAAATGTCTGGAATCATTCCTCGTGAGCTTGGAAATCTAACCCAGATTCGAACACTGAAAATGTCCTCTAATAATTTTACTGGAGAACTACCTGCCACATTGGCAAAGCTCACTACATTGCGCGATTTCGAAATTTCGGACAACCAGTTCTCTGGAAAGGTACCAGATTTTATTAAGAACTGGACAAATATCGGTACACTAACCATTCAAGGGAGTGGATTAAGCGGGCCAATTCCTTCTGAAATTTCACTTTTGAGAAACTTATCTGAATTGAGAATTAGTGATTTGAATGGATTAGAATATTCACCTTTGCCACCACTTGATAATATGCCATTGTTAAAAAATCTGATTCTGAGGAACTGCAAAATCAACGGAACACTACCTAAATATCTTGGGACTATACCAACATTAAAGCACTTAGACCTCAGCTTTAATAACATAAGTGGAACAATCCCGGATACCTTTGATGACATTAACGGTGCGAAATTCATATTTTTAACTGGAAACCTTCTCACTGGATCGGTGCCTGCTTGGAAAAAGAACGTTGACGTTGATCTTTCATACAATAACTTAAGCATCAGCCAAGGGAATCAGATATGTCAAAGTGATAAACTGAACTTGTTTTCTCCCTCATTGGCACACAATGACATAGGAACAGTTTCGTGTTTGCGCGATTGCCCAAAATCCTTGTACTCCCTTTATATAAATTGTGGTGGAAAGCATGCAATAGTCAAAAAAAGAAGTTATGACGATGATTCCGATTCTTCTGGAGCAGCTAAATTCCATGTCAGCCCAACAGGAAATTGGGCATTTAGCTCTACCGGTATATTCATTGATGGTGATCAACTTGGAGAAACTTATTTCCCACGAAATATCACAACACTTACTATGGCAGATACTGAATTGTACATGACTGCACGTGGTTCTCCTATTTCTTTGACTTATTATGCCTTTTGCCTGGCAAATGGAGGCTACACAGTAAATCTACATTTTGCCGAAATAATGTTCACTGACGATCAAACGTATGCTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAATCCGGTGCAAAAGGATTTCAATATTGCAAAAGAAGCGGGAGGAGTTGGTAAGAAAGTGATAAAACAGTTCAAAGATATCGTTGTTAGTAGTAATACTTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACACAGTCTCTCCCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCGGTGGAATCTGACTCTCCACCTGGAAGCATATCAACTGTAGCTGTCGTTGGAATTGTGGTTGCAGCAATAGTTATTATCATTCTTGTATTTGGTATACTGTGGTGGAAAGGATGTTTTGGAAAGAAAAATTCTTTAGCAAGAGAGCTAAATAGTTTGGACGTACAGACAGGTATTTTTACCTTACGACAAATAAAAGCAGCAACAGATAACTTCGATGTTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGAATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCCACGGTTGTTGTGTGGAGGGAGATCAGTTGATGCTGGTATACGAATACTTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAAGAAGGCAGAAGATCTGTGTTGGTATTGCTAAAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACTAATGTTTTGCTTGATACAAATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGCACTAGAATTGTTGGCACCTATGGATACATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTCGGAATTGTTGCTTTGGAAATTGTTAGTGGAAGGAGCAACACCATGTATCGGTTAAAGGAGGAAGCATTCTATCTTCTTGAATGGGCACATTTGTTGAAAGAGAGAGGTGACCTAATGGAGCTAGTTGATAGCAGATTAGGTTCAGATTTCAAAAAAAAGGAAGCCATGGTGATGATAAATGTCGCTCTCCTATGCGCCAATGACACTTCAAACCTTAGGCCGTCTATGTCTTCAGTGGTAAGTATGCTTGAAGGAATGACTGTGGTTCCAGAATTTGTTTCATATTCAAGAGAAGTGATGGATGAACAGAAGTTGGAAATAATGAGGCAGTATTACTCTAAAATGGAAGTCACAAAGTTGGAGTTTATCAATTGA 2928 0.3938 MARSTQFFFLSFILIWSISLTAFGATTIHPDEKKALEVIAKSLGKNDWNFDIDPCSNQPNWATPKPAHPSPRLNIVENNVTCNCSISADNFCHVVEITLKGQNLPGTLPPELNRLRYLQIIDFSRNYLNGTIPKEWGSMMNIRNISLPSNRLTGSIPVEIANISTLIQLDLTANQMSGIIPRELGNLTQIRTLKMSSNNFTGELPATLAKLTTLRDFEISDNQFSGKVPDFIKNWTNIGTLTIQGSGLSGPIPSEISLLRNLSELRISDLNGLEYSPLPPLDNMPLLKNLILRNCKINGTLPKYLGTIPTLKHLDLSFNNISGTIPDTFDDINGAKFIFLTGNLLTGSVPAWKKNVDVDLSYNNLSISQGNQICQSDKLNLFSPSLAHNDIGTVSCLRDCPKSLYSLYINCGGKHAIVKKRSYDDDSDSSGAAKFHVSPTGNWAFSSTGIFIDGDQLGETYFPRNITTLTMADTELYMTARGSPISLTYYAFCLANGGYTVNLHFAEIMFTDDQTYASLGRRVFDIYLQGNPVQKDFNIAKEAGGVGKKVIKQFKDIVVSSNTLEIRLYWAGKGTQSLPNRSVYGPLISAISVESDSPPGSISTVAVVGIVVAAIVIIILVFGILWWKGCFGKKNSLARELNSLDVQTGIFTLRQIKAATDNFDVSNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLMLVYEYLENNSLARALFGPEEHQIKLDWSRRQKICVGIAKGLAYLHEESRLKVVHRDIKATNVLLDTNLDPKISDFGLAKLDEEDNTHISTRIVGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTMYRLKEEAFYLLEWAHLLKERGDLMELVDSRLGSDFKKKEAMVMINVALLCANDTSNLRPSMSSVVSMLEGMTVVPEFVSYSREVMDEQKLEIMRQYYSKMEVTKLEFIN* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2478 975 Pfam Protein tyrosine and serine/threonine kinase 665 933 IPR001245 GO:0004672|GO:0006468
Mtr2g2478 975 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 81 296 - -
Mtr2g2478 975 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 297 351 - -
Mtr2g2478 975 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 385 954 - -
Mtr2g2478 975 Gene3D Ribonuclease Inhibitor 273 390 IPR032675 -
Mtr2g2478 975 Gene3D Transferase(Phosphotransferase) domain 1 739 951 - -
Mtr2g2478 975 Gene3D - 405 596 - -
Mtr2g2478 975 Gene3D Phosphorylase Kinase; domain 1 631 738 - -
Mtr2g2478 975 SMART serkin_6 663 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2478 975 Pfam Malectin domain 406 591 IPR021720 -
Mtr2g2478 975 Gene3D Ribonuclease Inhibitor 206 272 IPR032675 -
Mtr2g2478 975 SUPERFAMILY Protein kinase-like (PK-like) 645 946 IPR011009 -
Mtr2g2478 975 Gene3D Ribonuclease Inhibitor 32 205 IPR032675 -
Mtr2g2478 975 CDD STKc_IRAK 669 937 - -
Mtr2g2478 975 ProSiteProfiles Protein kinase domain profile. 663 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2478 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Mtr2g2478 975 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Mtr2g2478 975 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 297 351 - -
Mtr2g2478 975 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 81 296 - -
Mtr2g2478 975 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 385 954 - -
Mtr2g2478 975 SUPERFAMILY L domain-like 73 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2478 Mtr-Chr2 37300716 37318646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2478 25 963 Receptor kinase-like Gene Family AT1G53420 53.089 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g2478 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2478 - - gmx:732563 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2478 2 37300716 37318646 Mtr2g2478 2 37300716 37318646 ECH