Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2474 ATGAAGCTTATCATGAACACGTCTTTGCATCTTTTGTTTCTTTCCTTTTGTTTGATCTCTTCATTTGCTAGAGGAGCTACTCTCTTACAAGAAGAAGTACAAGTTATGAAAGATGTAGCTAAGACACTTGGGAAGAAGGATTGGGACTTCAACATAGATCCATGTAGTGGAGAAAATAATTGGACAACTTCTAGTCCAATGAAAGGGTTTGAAAATGCTGTCACTTGCAATTGCACTTTTGCCAATGCCACTGTCTGTCATATTGTTAGCATTGTTCTCAAGTCACAAAATCTTTCTGGCACACTTCCAAGGGAACTTGTGAGATTGCCTTACCTCCAACAAATTGATCTCACAAACAACTACCTTAATGGTACAATCCCTCCACAATGGGGTTCCATGAATCTTGTCAACATTTCACTCATAGGAAACCGATTAACGGGTTCAATCCCGAAAGAGCTTGGAAACATCAGCACCATGCAAAAATTGATTCTGAAGTTCAATCAGTTATCTGGAGATCTTCCACCGGAGCTTGGGAATCTTCACCAGCTTGAAAGACTGCTTCTTACCTCGAACTTTTTTACCGGTAATTTACCTCCAACATTTGCTAACCTCACTAAACTGAAGCACATTCGACTTTGCGACAATCAATTTTCTGGAACTATACCTCATTTCATTCAGAACTGGACAATTCTTGAGAGGATGGTGATGCAAGGGAGTGGTTTGAGTGGTCCAATTCCTTCTGGAATTTTAAATCTGAAAAACCTCACTGACTTGAGAATAAGCGACTTGAAAGGATCAGATTCTCCATTTCCGCAAGTTATTGGCTTGAAAAATATTCAAACATTAGTGCTGAGGAGTTGCAATCTTATAGGAGAAGTTCCCGACTATCTTGGAAATATTACTACTTTAAAATCTTTAGATCTCAGTTTTAACAAATTAACTGGACCGATTCCGAACACCTTGGGTGGCCTGACGAGCATAAGTATGCTATACTTAACTGGAAACCTTTTGACTGGACCGCTTCCAAATTGGATTGCTAAACTAGACTACACAGATCTTTCGTATAACAATTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAGGGAACCGTGAACTTGTTTGCATCATCTTCAAAGCGAAATAACTTGGGAAGGGTTTCATGTTTGGGGAACTTCAGCTGTCCTAAAACTTCGTACTCTCTCCGTATAAATTGTGGTGGTAAGCAAATAACTTCTAATGAAAGCTTGACGTATGATGATGATTCAAATGAAACTGGACCAGCAGCAAGCTTTCACCTTAGTGAAACGAATTGGGCACTTAGCAACACCGGCCACTTCTTTGATACTAGCCTTAAGGAGGATTACTATACCTGGTCTAATAAAAACCTTTCCATCGACAATGGTGAGTTGTATATGGATGCACGGGTTTCTCCGCTTTCCCTAACATATTATGGATTTTGCATGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCGGAGATAATGTTCGCCGATGACCAAACATATAGCAGTCTTGGGAGGCGTATATTTGACATCTATATTCAGAGAAGGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCCGGTGGAGTTGGTAAAGCAATCATAAAGAAGTTCACTGCTAATGTGACTAGTAATACATTGGAGATTCGCCTTCATTGGGCGGGGAAAGGGACAACCGGTATCCCATTTGATTCAGTACATGGTCCTCTTATATCGGCTATATCTGTTGATCCTGACTTTACACCGCCGGTGGAAAAGGGAAGTAGCATGCCTGTTTGGAAAATTGCTGTGATTGTTGCTGGAGGACTAGTTATCTTACTGATATTTGGAATATATTGGGGGAGAAGATGTCGACGACATATAGGTCCGTTAGAAAGAGACCTAAAGGGTTTAGATTTCCAACCTGGGCTATTTACGTTACGGCAGATCAAAGCAGCAACAAACAACTTTGATATTGCCTATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTCAGACGGCACAATAGTAGCAGTTAAGCAGCTTTCTTCTAAATCAAAGCAAGGGAACCGCGAATTTATAAATGAGATCGGCTTGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTCTATGGTTGCTGTATGGAGGGAGATCAGTTATTGCTAATATATGAATACATGGAAAATAATAGCCTTGATTGTGCTTTGTTTGCCAAAGAAAACTGTCCATTGAAATTGACTTGGTCGACAAGGAAGAAAATTTGCGTCGGTATTGCTAGAGGTTTGGCTTACCTACATGAAGAGTCGAGGCTTAAGATAGTTCACAGGGACATCAAAGCAACTAATGTGTTGCTCGATAAAGATCTCAATCCAAAGATATCGGATTTTGGTTTGGCCAAGCTTAAAGATGACGGACACACACATATAACTACTAGAGTAGCCGGCACTTATGGATATATGGCTCCAGAATATGCAATGCACGGATATTTGACGGAGAAAGTGGATGTTTATAGTTTTGGAGTAGTTGCCTTGGAAATTGTTAGTGGGAAGCACAACACCATGAATAGGCCAAGGGATGAATGCTTCTCTCTTGTTGATCGGGTGCATCTCTTAAAGGAAGAAGGTAACATAATGGACCTAATTGATGAGAGATTAGGTGAAGATTTCAACAAAGAGGAAGCAATGATCATGATCAATGTAGCTCTTTTATGCACTCGTGTTTCTCCGATGCATAGACCAACCATGTCATCAGTTGTAAGCATGCTTGAAGGACAATCTGATGTTGAAGAAGTTAAACAAGACACAAGCCAAGTTTTTGAAGGCAATAAGTTGGAAATTATTCAACAGTATCATCAACAGTTGGAAATTATTCAACAGTATTGTGAACAAAGTGAAAAAGTTTATACACCTGAGACTCAAGAAGAGAGCATCTTAATAAGTGAAACTGCAGAATTTATGTCTCATACAGATATGCGTTCTATCAGCATGGATTCTCCTTATAGATTTTAA 3042 0.3971 MKLIMNTSLHLLFLSFCLISSFARGATLLQEEVQVMKDVAKTLGKKDWDFNIDPCSGENNWTTSSPMKGFENAVTCNCTFANATVCHIVSIVLKSQNLSGTLPRELVRLPYLQQIDLTNNYLNGTIPPQWGSMNLVNISLIGNRLTGSIPKELGNISTMQKLILKFNQLSGDLPPELGNLHQLERLLLTSNFFTGNLPPTFANLTKLKHIRLCDNQFSGTIPHFIQNWTILERMVMQGSGLSGPIPSGILNLKNLTDLRISDLKGSDSPFPQVIGLKNIQTLVLRSCNLIGEVPDYLGNITTLKSLDLSFNKLTGPIPNTLGGLTSISMLYLTGNLLTGPLPNWIAKLDYTDLSYNNLSIENPEQLTCQQGTVNLFASSSKRNNLGRVSCLGNFSCPKTSYSLRINCGGKQITSNESLTYDDDSNETGPAASFHLSETNWALSNTGHFFDTSLKEDYYTWSNKNLSIDNGELYMDARVSPLSLTYYGFCMGNGNYTVNLHFAEIMFADDQTYSSLGRRIFDIYIQRRLVLKDFNIAKEAGGVGKAIIKKFTANVTSNTLEIRLHWAGKGTTGIPFDSVHGPLISAISVDPDFTPPVEKGSSMPVWKIAVIVAGGLVILLIFGIYWGRRCRRHIGPLERDLKGLDFQPGLFTLRQIKAATNNFDIAYKIGEGGFGPVYKGVLSDGTIVAVKQLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLDCALFAKENCPLKLTWSTRKKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDDGHTHITTRVAGTYGYMAPEYAMHGYLTEKVDVYSFGVVALEIVSGKHNTMNRPRDECFSLVDRVHLLKEEGNIMDLIDERLGEDFNKEEAMIMINVALLCTRVSPMHRPTMSSVVSMLEGQSDVEEVKQDTSQVFEGNKLEIIQQYHQQLEIIQQYCEQSEKVYTPETQEESILISETAEFMSHTDMRSISMDSPYRF* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2474 1013 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Mtr2g2474 1013 Pfam Protein kinase domain 665 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2474 1013 Gene3D Ribonuclease Inhibitor 45 159 IPR032675 -
Mtr2g2474 1013 Gene3D Ribonuclease Inhibitor 160 227 IPR032675 -
Mtr2g2474 1013 CDD STKc_IRAK 668 935 - -
Mtr2g2474 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Mtr2g2474 1013 Gene3D Ribonuclease Inhibitor 228 372 IPR032675 -
Mtr2g2474 1013 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2474 1013 SUPERFAMILY L domain-like 82 358 - -
Mtr2g2474 1013 Gene3D Transferase(Phosphotransferase) domain 1 738 958 - -
Mtr2g2474 1013 Pfam Malectin domain 402 586 IPR021720 -
Mtr2g2474 1013 ProSiteProfiles Protein kinase domain profile. 662 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2474 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 349 - -
Mtr2g2474 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 289 - -
Mtr2g2474 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 380 971 - -
Mtr2g2474 1013 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 289 - -
Mtr2g2474 1013 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 380 971 - -
Mtr2g2474 1013 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 349 - -
Mtr2g2474 1013 SUPERFAMILY Protein kinase-like (PK-like) 644 943 IPR011009 -
Mtr2g2474 1013 Gene3D Phosphorylase Kinase; domain 1 639 737 - -
Mtr2g2474 1013 Gene3D - 398 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2474 Mtr-Chr2 37218272 37226432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2474 19 987 Receptor kinase-like Gene Family AT1G53420 52.766 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g2474 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2474 - - gmx:100786496 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2474 2 37218272 37226432 Mtr2g2474 2 37218272 37226432 ECH