Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2472 ATGAAGCTTATCATGAACACGTCTTTGCATCTTTTGTTTCTTTCCTTTTGTTTGATCTCTTCATTTGCTAGTGGAGCTACTCTCTTACAAGAAGAAGTAAAAGTTATGAAAGAGATAGCAAAGACACTTGGGAAGAAGGATTGGGACTTCAACATAGATCCATGTACTGGAGAAAATAATTGGAAATCTTCTGTGCAAGTTAAAGGGTTTGAAAATGCTGTCACATGCAATTGCACTTTTGCCAATGCCACTGTCTGTCATATTGTTAGCATATCACAAAATCTTTCCGGCACACTTCCAAGGGAACTTGTGAGATTGCCTTACCTCCAACAAATTGATCTCTCAAACAACTACCTTAATGGTACAATCCCTCCACAATGGGGTTCCATGAATCTTGTCAACATTTCACTCATAGGAAACCGATTAACGGGTTCAATCCCGAAAGAGCTTGGAAACATCAGCACTATGCAAAAATTGATTCTGAAGTTCAATCAGTTATCTGGAGAGCTTCCACCAGAGCTTGGGAATCTTCACCAGCTTGAAAGACTGCTTCTTACCTCGAACTTTTTTACTGGTAATTTACCTGCAACGTTTGCTAAGCTCACTAAACTGAAGCACATTCGACTTTGTGACAATCAATTTTCTGGAACTATACCTGATTTCATTCAGAGCTGGACAATTCTTGAGAGGATGGTGATGCAAGGGAGTGGTTTGAGTGGTCCAATTCCTTCTGGAATTTCATATCTGAAAAACCTCAATGGCTTGAGAATAAGCGACTTGAAAGGATCAGATTCTCCTTTTCCGCAACTTATTGGCTTGACAAATATTCAAACATTAGTGCTGAGGAGTTGCAATCTTATAGGAGAAGTTCCCGACTATCTTGGACATATTACTACTTTAAAATCTTTAGATCTCAGTTTTAACAAATTAACTGGACCGATTCCGATCACCTTGGGTGGCCTGAAGAACATAAATATGCTATACTTAACTGGAAACCTTTTTACTGGACCGCTTCCAAATTGGATTGCTAGACCAGACTACACAGATCTTTCGTATAACAATTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAGGGAACCGTGAACTTATTTGCATCATCTTCAAAGCGAAATAACTTGGGAAGGGTTTCATGTTTGGGGAACTTCAGCTGTCCTAAAACTTCGTACTCTCTCCGTATAAATTGTGGTGGTAAGAAAATAACTTCGAATGAAAGTTTGACATATGATGATGATTCAAGTCAAGTTGGACCAGCAAGCTTTCAGCGAACTGGATCAAACTGGGCCCTTAGCAACACTGGTCACTTCTTCGATAGCCTTGCGGACTACTATACCTGGTCTAACAAAACTAACCTTGCCATGGAAAATGCCGAACTGTATATGGATGCACGGGTTTCGCCGCTTTCTCTAACATATTATGGCTTTTGTCTGGGAAATGGAAACTACACTGTAAATCTCCATTTTGCGGAGATAATGTTTACGGATGATCAAACATATAACAGCCTTGGAAGACGTATATTTGACATATATATTCAGGGAAGGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCCGGTGGAGTTGGTAAGGCAATCATAAAGAAGTTCACTGCTAATGTGACTAGTAATACGTTGGAGATTCGCCTTCATTGGGCGGGGAAAGGGACAACCGGTATCCCATTTGATTCAGTACATGGTCCTCTTATATCGGCTATATCGGTTGATCCTGACTTTACACCGCCGGTGGAAAAAGGCAGTAGCATACCTGTTTGGGAAATTGCTGTGATTGTTGTTGCTGGAGGACTAGTTATCTTACTAGTATTTGGTATATATTGGTGGAGAAGATGTCGACAACATATGGGTCCGTTAGAAAGAGAGCTAAAGGGTTTAGATTTCCAACCTGGGCTATTTACGTTACGGCAAATCAAAGCAGCGACTAACAACTTTGATATTGCCTATAAGATTGGAGAAGGAGGGTTTGGTCCGGTTTACAAGGGTGTTCTTTCAGACGGCACAATAGTAGCAGTTAAGCAGCTTTCCTCTAAATCAAAGCAAGGGAACCGCGAATTTATAAATGAGATCGGCTTGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTCTATGGTTGCTGTATGGAGGGAGATCAGTTATTACTAATATATGAATACATGGAAAATAATAGCCTTGCTTGTGCTTTGTTTGCCAAAGAAAACGCTCAATTGAAATTGACTTGGTCGACAAGGAAGAACATTTGTGTCGGTATTGCTAGAGGTTTGGCTTACCTACATGAAGAGTCGAGGCTTAAGATAGTTCACAGGGACATCAAAGCAACTAATGTGTTGCTCGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCTAAGCTTAAAGATGACGGACACACACATATAACTACTAGAGTAGCCGGCACATATGGATATATGGCTCCAGAATATGCAATGCACGGATATTTGACGGAGAAAGTGGATGTTTATAGTTTTGGAGTCGTTGCCTTGGAAATTGTTAGTGGGAAGCACAACACCATGAATAAGCCAAGGGATGAATGCTTCTCTCTTGTTGATTGGGTGCATTTCTTAAAGGAAGAAGGTAACATAATGGACCTAATTGATGAGAGGCTAGGTGAAGATTTCAACAAAGAGGAAGCGATGATCATGATCAATGTAGCTCTTTTATGCACTCGTGTTTCTCCGATGCATAGACCAACCATGTCATCAGTTGTAAGCATGCTTGAAGGACAATCTGATGTTGAAGAAGTTATACAAGACACAAACCAAGTTTTTGAAGGCAATAAGTTGGAAATTATTCAACAGTATCATCAACAGTTGGAAATTATTCAACAGTATTGTGAACAAAGTGAAAAAGTTTATACACCAGAGACTCAAGAAGAGAGCATCTTAATAAGTGAAACTGCAGAATTTATGTCTCATACAGATATGCGTTCTATCAGCATGGATTCTCCTTATAGATTTTAA 3030 0.397 MKLIMNTSLHLLFLSFCLISSFASGATLLQEEVKVMKEIAKTLGKKDWDFNIDPCTGENNWKSSVQVKGFENAVTCNCTFANATVCHIVSISQNLSGTLPRELVRLPYLQQIDLSNNYLNGTIPPQWGSMNLVNISLIGNRLTGSIPKELGNISTMQKLILKFNQLSGELPPELGNLHQLERLLLTSNFFTGNLPATFAKLTKLKHIRLCDNQFSGTIPDFIQSWTILERMVMQGSGLSGPIPSGISYLKNLNGLRISDLKGSDSPFPQLIGLTNIQTLVLRSCNLIGEVPDYLGHITTLKSLDLSFNKLTGPIPITLGGLKNINMLYLTGNLFTGPLPNWIARPDYTDLSYNNLSIENPEQLTCQQGTVNLFASSSKRNNLGRVSCLGNFSCPKTSYSLRINCGGKKITSNESLTYDDDSSQVGPASFQRTGSNWALSNTGHFFDSLADYYTWSNKTNLAMENAELYMDARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYNSLGRRIFDIYIQGRLVLKDFNIAKEAGGVGKAIIKKFTANVTSNTLEIRLHWAGKGTTGIPFDSVHGPLISAISVDPDFTPPVEKGSSIPVWEIAVIVVAGGLVILLVFGIYWWRRCRQHMGPLERELKGLDFQPGLFTLRQIKAATNNFDIAYKIGEGGFGPVYKGVLSDGTIVAVKQLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLACALFAKENAQLKLTWSTRKNICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDDGHTHITTRVAGTYGYMAPEYAMHGYLTEKVDVYSFGVVALEIVSGKHNTMNKPRDECFSLVDWVHFLKEEGNIMDLIDERLGEDFNKEEAMIMINVALLCTRVSPMHRPTMSSVVSMLEGQSDVEEVIQDTNQVFEGNKLEIIQQYHQQLEIIQQYCEQSEKVYTPETQEESILISETAEFMSHTDMRSISMDSPYRF* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2472 1009 Pfam Leucine rich repeat 275 333 IPR001611 GO:0005515
Mtr2g2472 1009 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 286 344 - -
Mtr2g2472 1009 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 377 967 - -
Mtr2g2472 1009 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 78 286 - -
Mtr2g2472 1009 ProSiteProfiles Protein kinase domain profile. 658 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2472 1009 Pfam Protein kinase domain 661 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2472 1009 Gene3D Phosphorylase Kinase; domain 1 632 733 - -
Mtr2g2472 1009 SMART serkin_6 658 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2472 1009 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 377 967 - -
Mtr2g2472 1009 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 286 344 - -
Mtr2g2472 1009 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 78 286 - -
Mtr2g2472 1009 SUPERFAMILY Protein kinase-like (PK-like) 640 939 IPR011009 -
Mtr2g2472 1009 CDD STKc_IRAK 664 931 - -
Mtr2g2472 1009 Pfam Malectin domain 399 581 IPR021720 -
Mtr2g2472 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Mtr2g2472 1009 SUPERFAMILY L domain-like 76 355 - -
Mtr2g2472 1009 Gene3D Ribonuclease Inhibitor 156 226 IPR032675 -
Mtr2g2472 1009 Gene3D Ribonuclease Inhibitor 34 155 IPR032675 -
Mtr2g2472 1009 Gene3D - 395 585 - -
Mtr2g2472 1009 Gene3D Transferase(Phosphotransferase) domain 1 734 946 - -
Mtr2g2472 1009 Gene3D Ribonuclease Inhibitor 227 386 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2472 Mtr-Chr2 37199843 37206938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2472 19 983 Receptor kinase-like Gene Family AT1G53420 52.464 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g2472 Pkinase 8.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2472 - - mtr:MTR_2g073540 1545.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2472 2 37199843 37206938 Mtr2g2472 2 37199843 37206938 ECH