Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2463 ATGAAGATTCAGTGTAATGTTTGTGAAGGTGCAGAGGCTAAGGTTCTTTGTTGTGCTGATGAAGCTGCTTTATGTTGGGAATGTGATGAGAAAGTTCATGCTGCTAATAAACTTGCTAGCAAACATCAAAGAGTTCCTCTTTCTGCTTCTTCTTCTCATATGCCTAAATGTGATATTTGTCAGGAAGCATTCGGCTATTTCTTTTGTCTAGAGGATCGCGCTTTACTCTGTCGAAAATGTGATTTAGCGATACACACTGCAAATGCATATGTCTCAGGACATCAAAGGTTTCTTCTCACCGGTGTAAAAGTTGGCCTAGAAGCTACTGATCACGGCACTTCCTCAAATTCGTTGAAGACAGATTCTGGTGAGAAAGTTTCCGATACAAAATCTTCTTCTGTCTCAAGAAAGGTTTCGCAAATGCCTCAATCATCTGAGTACAATGAAATGTTGCCTACCGAAGCCGGAGGGTTTGGAGATTTTCCACCAGCCAAGGTGTCTTATGGTGGTGGTTCTAACTCTGGAAACATGTCACAGTGGACAATTGATGAATTTTTTGGCGTAAATGATTTCAGTCAGAATTATAACTACATGGATGGATCATCAAATTCAAGGGCTGACAGTGGTAAGCTTGAAGGTTCTGATTCTCCTATTTTAAGATCCAATGAAGAGGAAATGGAATACGACGACTACATGGACCGTGTTCCAGATTCGTCTTGGACAGTTCCTCAGATCCCTTCACCACCTACAGCTTCAGGGCTAAACTGGCCAAAAAACCCTCGGTATTCATTCGATAATGCTCTATTTGTTCCGGACATAGGCTTCACTAGCATGCAACACCCTCAGAATAGTAGTAATTTTTCAAGACCGCGGAATCATCATTAA 885 0.4147 MKIQCNVCEGAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSASSSHMPKCDICQEAFGYFFCLEDRALLCRKCDLAIHTANAYVSGHQRFLLTGVKVGLEATDHGTSSNSLKTDSGEKVSDTKSSSVSRKVSQMPQSSEYNEMLPTEAGGFGDFPPAKVSYGGGSNSGNMSQWTIDEFFGVNDFSQNYNYMDGSSNSRADSGKLEGSDSPILRSNEEEMEYDDYMDRVPDSSWTVPQIPSPPTASGLNWPKNPRYSFDNALFVPDIGFTSMQHPQNSSNFSRPRNHH* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2463 294 MobiDBLite consensus disorder prediction 276 294 - -
Mtr2g2463 294 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 283 - -
Mtr2g2463 294 MobiDBLite consensus disorder prediction 275 294 - -
Mtr2g2463 294 MobiDBLite consensus disorder prediction 110 145 - -
Mtr2g2463 294 Gene3D Classic Zinc Finger 1 92 - -
Mtr2g2463 294 CDD Bbox1_BBX-like 5 47 - -
Mtr2g2463 294 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Mtr2g2463 294 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Mtr2g2463 294 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mtr2g2463 294 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 283 - -
Mtr2g2463 294 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mtr2g2463 294 MobiDBLite consensus disorder prediction 240 256 - -
Mtr2g2463 294 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mtr2g2463 294 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mtr2g2463 294 MobiDBLite consensus disorder prediction 237 256 - -
Mtr2g2463 294 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2463 Mtr-Chr2 37087902 37091160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2463 1 273 C2C2-CO-like Transcription Factor Family AT1G78600 48.693 1.00e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mtr2g2463 zf-B_box 9.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2463 - - gmx:100790959 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2463 2 37087902 37091160 Mtr2g2463 2 37087902 37091160 ECH