Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2461 ATGGTGGGGTTCCAGAGTGAACATATGCCTGGAAACAAGTGTAATGGTAATTATAATAGTGGTTCCAGAGTTGAACGACTTGTGAGAGTAAGAGAACAAAGAAAAAGTATCAAGGCATCATCACCTGATATTGTTGTTATTAACAATAATAACAATATTAATAGCAATAATAATAATAATAATAATGTTAATAATAACTATAATGATAGTGAAAAACATGTGGTTACTGAATCTTTTGAGCATGACCTAAGCTTAAAAGAATGTAATAACTCTGGTGCTTCCCATTTTGAACGATTCCTGGAAGGTGCTGCAGCAGCAAAGGCTCTTAGTAATGGATATGAAAGGGAAGATGGAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCTAATAGATTGCCAGTTTCAGCTGTTAGGAAAGGCGAGGATTCTTGGTCTCTGGAGATCAGTGCTGGCGGCTTGGTCAGCGCTCTTTTAGGTGTGAAGGATTTTGAAGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGGCGGATGCGGTTGGACAGAAGACACTCACTGAAGCATTAGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGAGATTGTTCATCAGTACTATAATGGCTATTGCAATAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAGCGACAACACGTGGATTCCAGTCTCAGTTTGATTCGTATCAGGTGGCAAACCAAATGTTTGCTGATGTTGTAAATCAGGTCTATGAAGAGGGAGATATTGTTTGGTGTCATGATTATCATCTCATGTTTCTACCTCAATGCTTAAAGAAATTTAACAGCAAAATGAAAGTTGGTTGGTTTCTCCATACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCAGAACTCTTGCGTGCAGTTCTTGCTGCTGATTTGGTCGGTTTCCACACATACGATTATGCACGACACTTTGTTAGTGCGTGTACTCGCATTCTTGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCAAGGGAAACTGACTCGAGTTGCTGCGTTTCCAATTGGTATAGACTCGGATCGATTCATACGTGCACTTGACCATCCTCAAGTCCAAGCTCCATTCAAAGACTTAGTAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTTGCTTTTGAAAAATTCTTGGAAGAGAATGAGGATTGGCGAGAAAAGGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCCGAGTATCAAAAGCTTACAAGCCAAGTTCATGAAATTGTTGGCCGCATCAATGGCAGATTTGGAACACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGACTTTAACGCACTGTGTGCTTTGTACGCTGTTACAGATGTTGCACTTGTCACGTCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAGTTTGTAGCCTGTCAAGAAAAAAAGAAGGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCGCAGTCTCTTGGGGCTGGGGCACTTCTGGTCAACCCCTGGAACATCTCAAAAGTTGCCGAAGCAATTGCCAAAGCTCTGAACATGCCATCAGAAGAGAGAGAGAAGAGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCGCAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCACAGTTAAGGACAAAACAAGTTCCACCACGGCTCGATACCAGAAAGACAATTCAACAATATCTGAAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAGCAAGTTGAGAGAAAAGGTGATCAACTGAAAGAAATGGAACTCTCGGTGCATCCAGAATTGAAACAACCATTGACACAACTTTGCAATGACCCAAATACTACAGTTGTCGTTCTTAGTGGAAGTGGTAGAACACTTCTAGATGAAAACTTCAAAGAATACAACACTTGGCTAGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAATGGAGAATGGATGACTACAATGCCAGAACAACTAAACATGGAATGGGTTGACAGTGTAAAGCATATTTTTGAATACTTCACTGAAAGAACTCCTCGGTCGTATTTTGAAGAAAGGGAAGCTTCCCTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGGAAACTTCAAGCAAGGGACATGCTCCAACATCTCTGCACAGGTCCAATTTCAAATGCATCAGTTGAAGTTGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATTGTTCACAGTAAATCGATGACTACACCAATAGATTATGTTCTATGTATAGGACATTTTCTGGCAAAGGACGAAGATATATATGACTTTTTTGAGCCAGAGCCTTCTTCTTTTGGTGCAAGTCTTCAGCGAAGCAAGTTATCAGATGCAGCTAAGTTTCCCAATGAGAAGGTATCACCTATGAAGATCCCATCAATTAAAAATGGATTCAAGTCAGCAAATCAAAGCAAGGGACAGCGACCTATCTCAAATTCAGAGAAGAAAACAGCAAATAATGTCAACCGCACGGTGCGGAAGTGTAAATCACCTTTGCCAGAAAAGATCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCGTGTGCTGTTGGAAGAACTCAAACAAATGCTCGATTTACACTTCCATCGTCTGACGAGGTTGCTGAATTTCTGAAGAAACTTGCGCATGCATCTTCTCGTAATTACTGA 2889 0.4164 MVGFQSEHMPGNKCNGNYNSGSRVERLVRVREQRKSIKASSPDIVVINNNNNINSNNNNNNNVNNNYNDSEKHVVTESFEHDLSLKECNNSGASHFERFLEGAAAAKALSNGYEREDGKPVRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKDFEARWIGWAGVNVADAVGQKTLTEALAEKRCIPVFLTEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRGFQSQFDSYQVANQMFADVVNQVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDQGKLTRVAAFPIGIDSDRFIRALDHPQVQAPFKDLVERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRTLDFNALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGALLVNPWNISKVAEAIAKALNMPSEEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLDTRKTIQQYLKSTNRLLILGFNGTLTEQVERKGDQLKEMELSVHPELKQPLTQLCNDPNTTVVVLSGSGRTLLDENFKEYNTWLAAENGMFLNPSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSYFEEREASLVWNYRHADVEFGKLQARDMLQHLCTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKDEDIYDFFEPEPSSFGASLQRSKLSDAAKFPNEKVSPMKIPSIKNGFKSANQSKGQRPISNSEKKTANNVNRTVRKCKSPLPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDEVAEFLKKLAHASSRNY* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2461 962 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g2461 962 Gene3D - 624 805 IPR023214 -
Mtr2g2461 962 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 49 955 IPR001830 GO:0003824|GO:0005992
Mtr2g2461 962 MobiDBLite consensus disorder prediction 869 893 - -
Mtr2g2461 962 Gene3D - 711 791 - -
Mtr2g2461 962 Gene3D Glycogen Phosphorylase B; 117 370 - -
Mtr2g2461 962 CDD GT20_TPS 124 589 IPR001830 GO:0003824|GO:0005992
Mtr2g2461 962 MobiDBLite consensus disorder prediction 873 893 - -
Mtr2g2461 962 Pfam Trehalose-phosphatase 627 847 IPR003337 GO:0003824|GO:0005992
Mtr2g2461 962 CDD HAD_TPP 622 839 - -
Mtr2g2461 962 Pfam Glycosyltransferase family 20 124 589 IPR001830 GO:0003824|GO:0005992
Mtr2g2461 962 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 49 955 - -
Mtr2g2461 962 TIGRFAM T6PP: trehalose-phosphatase 620 837 IPR003337 GO:0003824|GO:0005992
Mtr2g2461 962 SUPERFAMILY HAD-like 621 955 IPR036412 -
Mtr2g2461 962 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 123 592 - -
Mtr2g2461 962 Gene3D Glycogen Phosphorylase B; 371 573 - -
Mtr2g2461 962 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 124 589 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2461 Mtr-Chr2 37024406 37041431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2461 9 959 Trehalose Biosynthesis Gene Families AT1G78580 72.428 0.0 1400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2461 K16055 - gmx:100789554 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2461 2 37024406 37041431 Mtr8g1587 8 22729798 22753047 ECH
Mtr2g2461 2 37024406 37041431 Mtr2g2461 2 37024406 37041431 ECH