Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2460 ATGGGAACACAACATTGGTTTTTTTCGAATGTTGTTTATGTTCTGTCCATCTCCATCCTCTTGGTCATGTCCAAACTGTGTTTGTGTGATATTCAATATATTGGCACAATCTCACCAGGGATGGAAGGTTCTCAAACAAATTTCATCGACAAAGACTTCAAGTTCCTCCTCTCAAAGAATAGAGTTTTTGCTTTTGGTTTTGTTGCTGCCGTCAATGACACCACCAAGTTTTTACTGGCAATCGTCCACACGGCTAGCTCCACCGTGCTTTGGGCTGCTAATAGAGCATTACCTGTTTCCAATTACGATAGTTTCGTGTTTGATAAAAATGGAAATGCCTTTTTGGAGAAAGATGGAATTGTGATCTGGTCTACAAACACAATTAGCAAAGCAATGGAATTGCAAGACAATGGAAATTTGGTTTTGCTTGGTAACGACGACAATGATACGGTAATTTGGCAAAGTTTTAGTTATCCAACTGATACTTTGATGCCTTCGCAGGAATTCAAAGAGGGAATGAAACTTACCAGTGAACCTAGTCCAAATAACTTGACCTATGTTCTTGAGATCAAATCAGGTAATGTTATTCTTTCAGCTGGTTACAAAACTCCACAAACATATTGGACTATGCAGAAGGATAACCGTAAAATAATAGATAAGGTCGGCCATGTTGTGGCGTTTGCAAATCTCAGTGACAATTCTTGGAGGTTCTATGATAACAATAAGTCTTTGTTATGGCAATTCATTTTCTCTGCTGATGGAGGCATAAATGGAAGTTGGATTGCAGTTTTGGGAAGGGATGGTGTCATTACTTTCTCGAATCTCAACGGTGGTGGATCAAACGGTGATTCTTCAACAAGAATACCACAAGATTATTGTGGTACACCAGAACCTTGTGATCCCTACAATATATGCGCAAACAAACGTACGTGTAGCTGTCCTCATGTTCTTCTTCCTAGTTGTAAACCAGGTTTTGTCTCTCCTTGTGATGATGATAAATCAAAAAAGTCTATAGAATTTCTGAAAGCTGATGATGGACTTGGCTACTTTGCGCTTGATTTTCTTCATCCCTATTTGAATACCGATTTGGCTGGTTGTCAGACATCTTGCCGTCGAAATTGCTCTTGTCTTGCAATGTTCTACCATACAAGTTCAGGGAACTGTTTCTTATTGGATAGCATCGGAAGTTTTCAGAAATCTGATGACGCTGATTCTGGTTATGTTTCTTACATTAAGGTCTCAAGTGATGGAAGTGGAAGCAGCAATAAGGACATCATAGTTGTTGTAGTCGTTGTCATATTATCAACTCTGCTTGTTCTGCTCTTTGCGGGTGTTCTATACTGCAGAAAAAAGAAAAAGTTTGCTCCAGAGAATTCAGAAGAAGACAATTTCTTGGAGAATTTAACCGGTATGCCAATCCGTTTCCGCTATAAAGATCTTGAAGTTGCAACGAATAACTTCTTTGTGAAGCTTGGTCAAGGTGGTTTTGGATCAGTTTACAAAGGAGTTCTACCTGATGGGAGTGAATTAGCTGTGAAGAAACTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTGGTAAAGCTTAAAGGATTTTGTGCAGATGGAACTCATAGGCTTCTAGTTTATGAGTATATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAAGTGCATTTCTTTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAACAGCAAAAGGGCTAGCTTATCTACATCAAGAATGTGACTCAAAGATTGTTCACTGTGACATCAAGCCTGAAAATGTACTTCTAGATGATCATTTCATTGCCAAAGTTTCAGATTTTGGTTTAGCCAAGCTCATGAATAGAGAACAAAGCCATGTTTTTACGACACTAAGAGGAACACGTGGCTACCTTGCACCTGAGTGGATAACAAACTACGCTATATCAGAGAAAAGTGATGTATACAGTTATGGGATGATGTTGCTTGAGATAATCGGGGGACGGAAGAATTATGATCCTAATGAGACTTCAGAGAAATCGAATTTCCCTCGTTTTGCTTTTAAGATGATGGAAGAAGGTAAAGTGAGAGATATCATTGATTCGGAGATGAAAATAGATGATGAGTTTGATGATAGGGTTCACTGTGCTATAAGTGTTGCATTGTGGTGTATACAGGAAGACATGTCTATGAGACCTTCCATGACAGAAGTTGTTCAAATGTTAGAGGGTCTTTGTACTGTTCCTAAACCACCAAAGTCCTCCAATGAAGGAGATACCTCTTCTGATGCTTATCTATCAGCAGTTAGTCTTTCAGGTCCAAGATAG 2370 0.3873 MGTQHWFFSNVVYVLSISILLVMSKLCLCDIQYIGTISPGMEGSQTNFIDKDFKFLLSKNRVFAFGFVAAVNDTTKFLLAIVHTASSTVLWAANRALPVSNYDSFVFDKNGNAFLEKDGIVIWSTNTISKAMELQDNGNLVLLGNDDNDTVIWQSFSYPTDTLMPSQEFKEGMKLTSEPSPNNLTYVLEIKSGNVILSAGYKTPQTYWTMQKDNRKIIDKVGHVVAFANLSDNSWRFYDNNKSLLWQFIFSADGGINGSWIAVLGRDGVITFSNLNGGGSNGDSSTRIPQDYCGTPEPCDPYNICANKRTCSCPHVLLPSCKPGFVSPCDDDKSKKSIEFLKADDGLGYFALDFLHPYLNTDLAGCQTSCRRNCSCLAMFYHTSSGNCFLLDSIGSFQKSDDADSGYVSYIKVSSDGSGSSNKDIIVVVVVVILSTLLVLLFAGVLYCRKKKKFAPENSEEDNFLENLTGMPIRFRYKDLEVATNNFFVKLGQGGFGSVYKGVLPDGSELAVKKLEGIGQGKKEFRAEVSIIGSIHHLNLVKLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSAFLLDWDTRFNIALGTAKGLAYLHQECDSKIVHCDIKPENVLLDDHFIAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMMLLEIIGGRKNYDPNETSEKSNFPRFAFKMMEEGKVRDIIDSEMKIDDEFDDRVHCAISVALWCIQEDMSMRPSMTEVVQMLEGLCTVPKPPKSSNEGDTSSDAYLSAVSLSGPR* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2460 789 Gene3D - 47 158 IPR036426 -
Mtr2g2460 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 774 - -
Mtr2g2460 789 ProSiteProfiles Bulb-type lectin domain profile. 41 155 IPR001480 -
Mtr2g2460 789 CDD STKc_IRAK 491 759 - -
Mtr2g2460 789 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Mtr2g2460 789 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Mtr2g2460 789 PIRSF SRK 8 785 IPR024171 GO:0004674
Mtr2g2460 789 SMART serkin_6 485 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2460 789 Pfam Protein kinase domain 489 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2460 789 SMART blect_4 47 159 IPR001480 -
Mtr2g2460 789 Pfam D-mannose binding lectin 88 170 IPR001480 -
Mtr2g2460 789 SUPERFAMILY Protein kinase-like (PK-like) 465 757 IPR011009 -
Mtr2g2460 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 774 - -
Mtr2g2460 789 CDD B_lectin 47 159 IPR001480 -
Mtr2g2460 789 MobiDBLite consensus disorder prediction 764 789 - -
Mtr2g2460 789 Gene3D Transferase(Phosphotransferase) domain 1 560 776 - -
Mtr2g2460 789 CDD PAN_AP_plant 325 414 - -
Mtr2g2460 789 MobiDBLite consensus disorder prediction 767 789 - -
Mtr2g2460 789 Gene3D Hepatocyte Growth Factor 352 414 - -
Mtr2g2460 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Mtr2g2460 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 210 IPR036426 -
Mtr2g2460 789 ProSiteProfiles Protein kinase domain profile. 485 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2460 Mtr-Chr2 37020606 37023494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2460 453 768 Receptor kinase-like Gene Family AT5G20050 47.748 1.40e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr2g2460 Pkinase 3.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2460 - - mtr:MTR_2g080100 1286.17