Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2442 ATGGATGTTATTTTTTCAGTTGCTGCTAAAATTGCTGAGTATATGTTTGTACCTATTGGACGTCAATTTGGTTACATACTCTACTACAAGGGCAACCTTGAAAGGATGAGAACCGAGGTCAAAAAGCTGGAAGGATCAAAAGATAGCATGCAACACACCGTGGATAAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAAAATTGGCTGAACAAAGTGGACAACACTCTTGCTAAGGCTAAGAAACTTATTGAGTCTGAAGGTCATGCAAAAGCTCAGTGTTCTATGAGACACTGTCCCAATCTGTGTACAAGGCATCAACTAAGCAGGAAGAACAAAAAGATGTCACAAGAGATTTCTGAAGTCCTGGCAGAAGGAAAATTCTACAAAATTTCTTACCGTGCTGCTTCTCGAGTGACAATCAAGCCATTTAGTTATGAGGCCTTGGACTCCAACACATCAATGTTGAGTGAGATTATGCTAGCATTGAAGAATCCTAACATCTTCATTATTGGGGTGTATGGGATGGGTGGAATAGGCAAGACAACACTGGTGAAAGAGTTAGCTTGGCAAGCTGAAAATGATGGGTCATATAGTGCTGTAGTTATGGCTACTATATCCGGGTCTCCAGATGTGGAAAAAATTCAAGGTCAAATTGCTGATGCCTTGGATATGACATTTAACAAGGAGACCAAAGAAGGAAGAGCAAGACAATTACTTGAAAGGATAACCAAGGAGAAGAATATTCTCATTGTTTTGGATGATATATGGGGTAGACTTGATTTGGAAGAAGTGGGGATTCCTTTTGGTGATGACCACAAAGGATGCAAGTTGGTGGTGACATCTAGAGACCTTAATGTGTTGAACCGTGAGATTGGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGAAGATAGTTGGAAATTATTTGAGAAAATGGCAGGTGATGTTGTTCAAGATTTTAATATTAAACCAATTGCAGTAGAAGTGGCCATTTGTTGTGCTGGTTTGCCCCTTCTGATTGTTGCAGTGGCAAAAGCTTTGAGGAAAAAAAAATTCTATGATTGGAAAAGCACATTAAATGAGTTAAATAGATTTGATAAAGAAGGGTTGCATAAGAAAATCTACTCTGCTTTAGAATTGAGTTATAATTGCTTAGAAAGTGATGAACTAAAGTCACTGTTCTTATTCATTGGTTCATTTGGCCTAGATCACCTCCACACTGCAGAACTATTTTTATGTTATTGGGGGTCGGGCTTATATAGAAACTCTCCCACATTGACAGATGCGAGAACCAGATACTACAAATTATTAAACGATCTCAAAGCATCTTCACTGTTAATTGAGTCTGAATTGGAACGGGTTAGAATTCATGATGTTGTTAAAGATGTGGCTAAATCAATCGCATCTAGGACTTGCCCAACCTATGGGGTGAAAAGGTTCACTTTGATAAAACAATGGCCAGTGATAGATCAAATTCAAAAATGTCATCAAATCATTCTACCTTGGTCTAATATTTACAATCTTCCTGAGAAGCTGGAGTGCCCAGAGCTGAAGTTACTTCTACTTCAAAATATAGGTGATTATTTGAAAGTCCCTGATGACTTCTTCTCCGGGATGAGAGAGCTAAAGGTTGTTAATTTATATGGAATGATGCTTACCCCTTTTCCACCAAAATCTCTTTGTCTCTTGACAAAAATCATATCATTGGAGTTGTCTGGATGTGTGTTGGAAGACATATCAATAGTTGCAGAGCTGAAGAGTTTAGAGATTCTTAGCCTTGAAAGATCTGATTTTAATGAGCTCCCAAAAGAAATAGGGCAACTAAATAATCTTCGAATGCTGAATTTAACCAACTGCTCTAGACTGAGATTCATTCCTGCGAATCTTATTTCAAGCTTAACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGGATGTCAAGGAAAGCAAAGATCAAAGCAGGAATGCAAGTCTAGAAGAGCTAAGGAATTTGTCTCAATTGACTACTTTAGACATAATGATTCAAGATGCTTCAGTTTTGCCCAAGGACTTGCAGGTTTTTGCAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGAGATGGTCTTTGGAATGGTCTGGAGGTGCTTCTGAATCTTCAAGAATACTTAAGCTCAGGGACAGTAGGAGTTCAAGCATTTTTCTTTATCGTGGGTTTAATTTCTTGTTGAATTCAGCTGAGGACATGTGTCTTGCGAAAATGCAATGTGTTAGAAATTTCCTTTATGAACTGAACATGGAAGGTTTTCCTCAACTAAAGCACTTGCACATTCAGGACAGTAGTGAGCTAATGTACATCATTAACTCAAAATCTGTCTATTCCTATCCGGCTTTCCCCAATTTAGAGACTTTGGCTCTTCAAAATCTGTTTAATCTAGAAGAAATATGTCGTGGCCCAATTCCAATTCAATCTTTTACCAAACTAAAATCTTTTGAAGTCAAAGGTTGTAACAAGTTGAAGAATCTGTTATGGTACTCCCTTGTTATAAACCTTCCGCAACTTCTCAAAATAAAAATTTCTGATTGTGAAATGATTACAGAAATCATAGCTGAGCAAAAATCTGAGGCTGATAAAGAAATCGACAAGATTATGTTCCCCAAGTTAGGTTCTCTTGAACTTGAGAATTTGCCTAGTCTCATTAGTTTCTGTTCCATGCCATTGATAGCTGATAAGTGTCTCAAAAAGTTTGGTGAATATAATGATGGTACACAGTGCATACCTGTGGCCCTAGTTGATGAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTTTCTAATATCAATTCTAGGAAACTGTGGGATGACAAACTTCCAGGTCATTCTTGCATGCAAAACTTGAAGAGTTTGACACTTGACAGATGTTGTAACATATCGTACGCATTCTCATCCTCAGTGGCTGGCGAGTTGGTAAATTTGAAGCATCTTGCGATTAGTAATTGCCAAATGTTGGAGGAGATATTTGTCTCAGATGGAATGCTTGACAATCCTCCTTTATCTCAGAAACCATTCTATAATGATGAGGTTATATTTCCAAACTTGGAGACATTGGTAATATCCCACATGGAACATTTGAAGTCAGTATGGCACAATCAACTTGCTCCAAAATCTTTATGCAAACTGAAACAGTTGAAAATTGAATTCTGCAATGAACTTTCAAATGTAATTCCATCTTATGTGCTTAATAAATTACAGAATCTGGAGATTGTGACTATATCTAATTGTCCCACACTAGAAGTTGTATTTGAAACACAAGGTTTAAAAGCAAATAGTGGTAGACAGACGCGGCTGGAAATGCAATTGAGAACTCTCACTTTGAAAAATTTACCAATGCTGAAGCAAATATGGAGTGGGAATCCTAATGACAGCTTCACGTTTGAAAACCTCTGCATATTGAAAGTTACTGAATGCAGAAGCCTTAATCATGTTTTTCCCTTCTCTGTGGCTAAAGAGCTTCAACATCTCCAAGAGCTTTATATAGAAGAATGTGGCGTAGAAATTATTGTAGCACATGATGAAATGGTTGACAGAGTTCCAATACTTATTTTCCCAGAATTAACTTCTTTGAGTTTCCAAGATTTGACAGAACTTCGAAGCTTCTACTATGGATTTCATACCTTGGATTGTCCAGTTTTAAGAGATCTGGATGTGCTTCATTGTGACAAGCTTGAACTATTCAAGCCAAAGACTCTATATTACCGAGACAGTGTCCCAGTTGATACACTTCCCCTTCTCTCAATTGAAAAGATTTTCACCACCGCAAGGGAGCTTATTCTGAATTGCAAGGACGTCACCATGTTATGCAACGGTCAACTTAATGATGAGCTGATCTACACAGTAAAAGCTCTTCGCCTACGATGTTTTCATGACACGACTGAAAAATTTCCATCTGGTTTCCTCCAAAGATTTATCCACCTGGAATATCTTAAGGTGTCATGTAGTTCCTTCTCAGAGATTTTCTTGAGTGGAAGCATTTGCACTGAACATTCTGAAACAACTATGAAGTTGAGAAGACTAGTACTTGCTGGATTAAAAAACCTTGAGTTTATATGTAAAGAGAAATCTGAGGTGCAACCGGTTCTTCAAAACATTGAAATATTGGAAGTATATATATGCTCTAGACTAAAGAATATATTTCCATCCGGAATGCTGTTTGAGAATTTAGAGCAATTGGAGGTGGGTGATTGTGCTGGATTGGAAAATATTATGAAATCGTCAACAGCTACAAGTTTACAAAAACTTAGAAAATTATGGATATATAATTGTGAAAAGATAGAAGAAATAGTTGCAACTGATGACGAAAATGATGCTTTTGAGATAAATTTTATGAAATTGGAGCATCTGCAGTTGAGTAACTTACCAATGCTAAGAAGTTTTTGCATGGGAAGACATGGCTTCAAATTTCCACAGCTGCAGAACTTATTTGTAATAGATTGTCCAATGATGGAAACTTTCTCACATGGAGCGTTGAACGCACCAAAGCTCATAGAAGTACATGTTAAGGAACAAGATGAATGGCATTGGAATGGTGACCTAAATAGTACAATAAGAAAATTCGTAGCTAAAACGGACTCTAAGGATGATTGA 4659 0.3743 MDVIFSVAAKIAEYMFVPIGRQFGYILYYKGNLERMRTEVKKLEGSKDSMQHTVDKARRNGEEIENIVQNWLNKVDNTLAKAKKLIESEGHAKAQCSMRHCPNLCTRHQLSRKNKKMSQEISEVLAEGKFYKISYRAASRVTIKPFSYEALDSNTSMLSEIMLALKNPNIFIIGVYGMGGIGKTTLVKELAWQAENDGSYSAVVMATISGSPDVEKIQGQIADALDMTFNKETKEGRARQLLERITKEKNILIVLDDIWGRLDLEEVGIPFGDDHKGCKLVVTSRDLNVLNREIGTQKEFRLEVLLEEDSWKLFEKMAGDVVQDFNIKPIAVEVAICCAGLPLLIVAVAKALRKKKFYDWKSTLNELNRFDKEGLHKKIYSALELSYNCLESDELKSLFLFIGSFGLDHLHTAELFLCYWGSGLYRNSPTLTDARTRYYKLLNDLKASSLLIESELERVRIHDVVKDVAKSIASRTCPTYGVKRFTLIKQWPVIDQIQKCHQIILPWSNIYNLPEKLECPELKLLLLQNIGDYLKVPDDFFSGMRELKVVNLYGMMLTPFPPKSLCLLTKIISLELSGCVLEDISIVAELKSLEILSLERSDFNELPKEIGQLNNLRMLNLTNCSRLRFIPANLISSLTCLEELYMGNCFIQWDVKESKDQSRNASLEELRNLSQLTTLDIMIQDASVLPKDLQVFAKLERYNIFVGDMWRWSLEWSGGASESSRILKLRDSRSSSIFLYRGFNFLLNSAEDMCLAKMQCVRNFLYELNMEGFPQLKHLHIQDSSELMYIINSKSVYSYPAFPNLETLALQNLFNLEEICRGPIPIQSFTKLKSFEVKGCNKLKNLLWYSLVINLPQLLKIKISDCEMITEIIAEQKSEADKEIDKIMFPKLGSLELENLPSLISFCSMPLIADKCLKKFGEYNDGTQCIPVALVDEKVGMPHLELLKLSNINSRKLWDDKLPGHSCMQNLKSLTLDRCCNISYAFSSSVAGELVNLKHLAISNCQMLEEIFVSDGMLDNPPLSQKPFYNDEVIFPNLETLVISHMEHLKSVWHNQLAPKSLCKLKQLKIEFCNELSNVIPSYVLNKLQNLEIVTISNCPTLEVVFETQGLKANSGRQTRLEMQLRTLTLKNLPMLKQIWSGNPNDSFTFENLCILKVTECRSLNHVFPFSVAKELQHLQELYIEECGVEIIVAHDEMVDRVPILIFPELTSLSFQDLTELRSFYYGFHTLDCPVLRDLDVLHCDKLELFKPKTLYYRDSVPVDTLPLLSIEKIFTTARELILNCKDVTMLCNGQLNDELIYTVKALRLRCFHDTTEKFPSGFLQRFIHLEYLKVSCSSFSEIFLSGSICTEHSETTMKLRRLVLAGLKNLEFICKEKSEVQPVLQNIEILEVYICSRLKNIFPSGMLFENLEQLEVGDCAGLENIMKSSTATSLQKLRKLWIYNCEKIEEIVATDDENDAFEINFMKLEHLQLSNLPMLRSFCMGRHGFKFPQLQNLFVIDCPMMETFSHGALNAPKLIEVHVKEQDEWHWNGDLNSTIRKFVAKTDSKDD* 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2442 1552 Gene3D - 135 295 IPR027417 -
Mtr2g2442 1552 SMART AAA_5 169 300 IPR003593 -
Mtr2g2442 1552 PRINTS Disease resistance protein signature 172 187 - -
Mtr2g2442 1552 PRINTS Disease resistance protein signature 245 259 - -
Mtr2g2442 1552 PRINTS Disease resistance protein signature 338 352 - -
Mtr2g2442 1552 PRINTS Disease resistance protein signature 611 627 - -
Mtr2g2442 1552 Coils Coil 107 127 - -
Mtr2g2442 1552 Coils Coil 33 74 - -
Mtr2g2442 1552 SUPERFAMILY L domain-like 461 907 - -
Mtr2g2442 1552 Gene3D Ribonuclease Inhibitor 922 1261 IPR032675 -
Mtr2g2442 1552 PANTHER RPP4C3 1 1124 - -
Mtr2g2442 1552 PANTHER RPP4C3 1124 1256 - -
Mtr2g2442 1552 PANTHER RPP4C3 1371 1524 - -
Mtr2g2442 1552 SUPERFAMILY RNI-like 1303 1508 - -
Mtr2g2442 1552 Gene3D - 304 391 IPR042197 -
Mtr2g2442 1552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 402 IPR027417 -
Mtr2g2442 1552 Pfam NB-ARC domain 164 388 IPR002182 GO:0043531
Mtr2g2442 1552 Gene3D Ribonuclease Inhibitor 495 916 IPR032675 -
Mtr2g2442 1552 CDD AAA 158 284 - -
Mtr2g2442 1552 PANTHER - 1 1124 - -
Mtr2g2442 1552 PANTHER - 1371 1524 - -
Mtr2g2442 1552 PANTHER - 1124 1256 - -
Mtr2g2442 1552 Gene3D Ribonuclease Inhibitor 1278 1532 IPR032675 -
Mtr2g2442 1552 SUPERFAMILY L domain-like 937 1253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2442 Mtr-Chr2 36777695 36788888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2442 160 475 WRKY Transcription Factor Family AT5G45050 26.911 1.30e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2442 - - mtr:MTR_2g072030 2253.02