Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2439 ATGCAACAAGCAACAAATTGTTTTGACGCTGAGCTAATAATTGGAAAAGAAGGATTTGGCAAAGTGTACAAAGGAACGCTTGAAAATGGAGAAGTAGTAGCTATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTCGGTGAATTCCAAAACGAGATTGAGTTGTTGTCTGGTCTTAGTCATTCAAACCTTGTCTCACTTGTAGGTTGTTATAACGAAGACTCAGAACTGATTCTTGTGTACAATTACATGGCAAATGGATCTCTCAGCAGTCATCTATATGGGAGAGACTTTGTTCCTCTATCTTGGAAGCAACGCCTAGCGATATGCTTAGGGGCTGCAAAGGGACTTTTATATCTTCACACTGGAGCTAAACAAAGCATAATTCACCGTGACGTGAAGACAACAAACATTCTCTTGGACAAAAAGATTGTGCCAAAAGTTTCTGATTTTGGCATATCGAAAAAGGGTCCTATTCTTGATAAGAGTCACGTTACAACTAATGTAAAGGGTAGTTTTGGCTATGTTGATCCTGAATATTTTAGGACTAAGTTTCTAACTAAGAAATCAGATGTTTTCTCTTTTGGAGTGGTGTTGATTGAAGTTATATGTGGAAAACCTGCTTTAGATGATGCCCTTCCAACGCAACAGATGAATTTGGCATTGCGGGCATTAAGTTGCGATAAAAAGGGTACCTTTCATGAAATGATGGACCCATATTTGATTGGCAAAGTGAATATGGATTCTCTAAACAAGGTTTTATAG 765 0.3817 MQQATNCFDAELIIGKEGFGKVYKGTLENGEVVAIKVANPESRQGLGEFQNEIELLSGLSHSNLVSLVGCYNEDSELILVYNYMANGSLSSHLYGRDFVPLSWKQRLAICLGAAKGLLYLHTGAKQSIIHRDVKTTNILLDKKIVPKVSDFGISKKGPILDKSHVTTNVKGSFGYVDPEYFRTKFLTKKSDVFSFGVVLIEVICGKPALDDALPTQQMNLALRALSCDKKGTFHEMMDPYLIGKVNMDSLNKVL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2439 254 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 2 253 - -
Mtr2g2439 254 ProSiteProfiles Protein kinase domain profile. 8 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2439 254 SMART serkin_6 8 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2439 254 Gene3D Transferase(Phosphotransferase) domain 1 84 254 - -
Mtr2g2439 254 PANTHER OS07G0166700 PROTEIN 2 253 IPR045272 GO:0004714|GO:0006468
Mtr2g2439 254 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mtr2g2439 254 Pfam Protein tyrosine and serine/threonine kinase 13 215 IPR001245 GO:0004672|GO:0006468
Mtr2g2439 254 SUPERFAMILY Protein kinase-like (PK-like) 3 226 IPR011009 -
Mtr2g2439 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2439 Mtr-Chr2 36728441 36729384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2439 1 252 Receptor kinase-like Gene Family AT5G59700 57.143 4.07e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr2g2439 PK_Tyr_Ser-Thr 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2439 - - mtr:MTR_8g467150 449.899