Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g2439 | ATGCAACAAGCAACAAATTGTTTTGACGCTGAGCTAATAATTGGAAAAGAAGGATTTGGCAAAGTGTACAAAGGAACGCTTGAAAATGGAGAAGTAGTAGCTATCAAAGTAGCAAATCCTGAATCTAGACAAGGTCTCGGTGAATTCCAAAACGAGATTGAGTTGTTGTCTGGTCTTAGTCATTCAAACCTTGTCTCACTTGTAGGTTGTTATAACGAAGACTCAGAACTGATTCTTGTGTACAATTACATGGCAAATGGATCTCTCAGCAGTCATCTATATGGGAGAGACTTTGTTCCTCTATCTTGGAAGCAACGCCTAGCGATATGCTTAGGGGCTGCAAAGGGACTTTTATATCTTCACACTGGAGCTAAACAAAGCATAATTCACCGTGACGTGAAGACAACAAACATTCTCTTGGACAAAAAGATTGTGCCAAAAGTTTCTGATTTTGGCATATCGAAAAAGGGTCCTATTCTTGATAAGAGTCACGTTACAACTAATGTAAAGGGTAGTTTTGGCTATGTTGATCCTGAATATTTTAGGACTAAGTTTCTAACTAAGAAATCAGATGTTTTCTCTTTTGGAGTGGTGTTGATTGAAGTTATATGTGGAAAACCTGCTTTAGATGATGCCCTTCCAACGCAACAGATGAATTTGGCATTGCGGGCATTAAGTTGCGATAAAAAGGGTACCTTTCATGAAATGATGGACCCATATTTGATTGGCAAAGTGAATATGGATTCTCTAAACAAGGTTTTATAG | 765 | 0.3817 | MQQATNCFDAELIIGKEGFGKVYKGTLENGEVVAIKVANPESRQGLGEFQNEIELLSGLSHSNLVSLVGCYNEDSELILVYNYMANGSLSSHLYGRDFVPLSWKQRLAICLGAAKGLLYLHTGAKQSIIHRDVKTTNILLDKKIVPKVSDFGISKKGPILDKSHVTTNVKGSFGYVDPEYFRTKFLTKKSDVFSFGVVLIEVICGKPALDDALPTQQMNLALRALSCDKKGTFHEMMDPYLIGKVNMDSLNKVL* | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g2439 | 254 | PANTHER | CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN | 2 | 253 | - | - | |
Mtr2g2439 | 254 | ProSiteProfiles | Protein kinase domain profile. | 8 | 254 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr2g2439 | 254 | SMART | serkin_6 | 8 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr2g2439 | 254 | Gene3D | Transferase(Phosphotransferase) domain 1 | 84 | 254 | - | - | |
Mtr2g2439 | 254 | PANTHER | OS07G0166700 PROTEIN | 2 | 253 | IPR045272 | GO:0004714|GO:0006468 | |
Mtr2g2439 | 254 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 83 | - | - | |
Mtr2g2439 | 254 | Pfam | Protein tyrosine and serine/threonine kinase | 13 | 215 | IPR001245 | GO:0004672|GO:0006468 | |
Mtr2g2439 | 254 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 226 | IPR011009 | - | |
Mtr2g2439 | 254 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g2439 | Mtr-Chr2 | 36728441 | 36729384 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g2439 | 1 | 252 | Receptor kinase-like Gene Family | AT5G59700 | 57.143 | 4.07e-100 | 308 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Mtr2g2439 | PK_Tyr_Ser-Thr | 2.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g2439 | - | - | mtr:MTR_8g467150 | 449.899 |