Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2434 ATGTCGGTGTATTTCATGCCAATGGCAACAATCGCACTTTCTTTGAATTCAAAGACTGATAAGCTGGCTTTGCTTGCTTTGAAGGAAAAGCTTACAAATGGTGTACCATATTATTTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGGAAGGGATTACATGTGGTCGTCGTCACATGAGAGTCACTGCCTTGCATTTGGAAAATCAAACATTTGGTGGCACTCTTGGATCATCCTTGGGAAATTTAACATTTCTTCAAAAGCTCAGCCTTTCAAATGTCAACTTGCATGGTGAAATTCCAACACAAGTTGGTCTTTTGAAACGATTGCGAGTTCTTCTCTTTGGAAACAACAATCTTCAAGGAGAGATTCCCATAGAGCTCACTAACTGCACAAATATCAAGGTAATTGATTTACCTTTCAATAAACTCATTGGAAGAGTTCCTGCATACTTTGGGTCAATGATGCAACTTACTTGGTTGTCTCTTGGTCACAATAATCTAGTTGGTACTATTCCATCTTCCCTAGGAAATCTTTCATCACTCGAAAAGCTTTCATTTCGACAAAATCACTTGGAAGGAAGCATACCATATTCTTTGGGTAGGTTGTCAGTTTTGACATGGCTGTCTCTAGGTGTAAATAATTTGTCAGGTGAAATCCCTCATTCTCTCTACAACCTATCAAATATTCAAATGTTTTCTATTGATTCAAACAAGTTATTTGGTAGTATTCAATCAAATATAGATCTCGTTTTTCCCAATCTTGAACGATTCTTTATAGGATCTAACCAAATTAGCGCAACTTTTCCGTCTTCAATATCCAACCTCACTGGATTGCAAGTGTTTGATAAATCATCTAATAATATTAATGGACCATTACCTCTTACTTTGGGTCGATTAAATAAACTTGAGTGGTTGAATATTGGAGGTAATTATCTTGGGAGTGGAGGATCTCATGATTTTGATTTCCTTCCATTGTTAACAAATTGTACCCAATTGTCAAGGATCTATCTTTATGACAATAATTTCGGTGGTGTGTTGCCGAATCTTATAGGAAACTTTTCAACTAATCTTCAATTTCTTCATATGGAGTATAATCAAATATATGGAGTGATCCCGAAAACAATTGGACAACTAATTGGTTTAGTTGCCTTAACCATTAGTTATAATTTACTTGAGGGAGCAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGGATCATTGGCTTTGGATGATAACAAATTCATCGGTAACATTCCATTAGTCATTGGCAATCTTACTTTTTTGAATGGAATATATCTATCTAACAATAAATTCGAAGGAAGCATTCCATTTACCATAAGAAATTGCACCAAATTGCAGGGATTATATTTTAATAGTAACAAATTGAGTGGTGATATACTCAATCAAACATTTGGCTATCTAGATGCTTTAATATTTTTTGACTTGTCTAACAACTTATTGACCGGCCCCATTCCTTCAGAATTTGGTAACTTGAAGCAACTTTCTCAATTGGATCTAAGCTTGAATAAGTTGTCTGGTGAAATTCCTAAGGATTTAGCTTCTTGCATAGCATTGACAGAACTTTGGTTGGGAGGAAACTTCTTCCATGGAGCTATACCTTTGTTCTTCGGTTCCTCTTTAAGGTCCCTTGAAAAATTAAACCTTTCTGAAAATAATTTCTCAGGCATCATCCCCTCTGAACTAGAAAATCTAACATATTTGAATAGTTTAGACTTGTCTTTTAACAATCTCTATGGCGAGTTTCCAAAAGGAGGTGTATTTAGCAATGTTTCAGCAATTTTACTAACAGGAAACAAGAACCTTTGTGGAGGAATATCTCCATTGAAGCTTCCTCCATGTTTTAAGGTTCCCTCCAAGAAACATAAAAACCCTTTCAAAAGGAAACTTATCATTGGCAGTGTAGTTGGTGGCGTTTTAATCTCATTCGCAGTTTTGATTATTCTTTATTTTCTCGCGAGAAAGTCCAAAAGGCTACCTACTTTACCATCTTCGAAAAATGGGAACTTCAGGGTTACTTATGGTGAGATACATGAGGCCACCAATGGGTTTTCTTCATCAAATTTGGTAGGGACAGGAAGCTTTGCCTCTGTTTACAAAGGATCTCTCCTTTACTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTCAAGCACGTGGAGCTACAAAGAGTTTCACAGCTGAATGCAAAGCTTTGGGAAAGATGAAGCACCGAAATCTTGTCAAGATTCTTACATGTTGTTCAAGCGTAGATTATAAGGGTGACGAGTTCAAGGCTATTGTTTTTGAGTTCATGCCTAAGGGGAGTCTAGAAAAGCTTCTGCACGATAACGAAGAGTCTGGAATTCATAATCTCAGCCTCACACAAAGGGTTGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATGGTACTGAGAATGTTGTAGTTCACTGTGATGTGAAACCAAACAATGTTCTTCTTGATGATGACATGGTAGCCCACTTGGGAGACTTTGGATTGGCAAGGTTAATTCATGGAGCCACAGCATATTCAAGTGTAGATCAAGTTAATTCGTCCACAATTAAGGGAACTATAGGATATGTTCCTCCTGAGTATGGAGCGGGTGGCCAAGTATCACCTCATGGTGATATCTACAGCTACGGAATTCTTCTATTAGAAATGCTCACTGGAAAGAGACCAACAAATAGCATGTCTTCTATTAGAAATGTTCCAGATGGAATCTTTGAGATAGTAGATTCACATTTGCTTTTGCCATTTGCTGAAGATGAGACAGGGATTGTGGAAAACAAGATTAGGAATTGCTTAGTGATGTTTGCTATAATTGGAGTTGCATGTTCTGAAGAGTTTCCATCTTATCGAATGCCGATAAAAGATGTTATAGCAAAGTTGAATGAAATCAAATCAATGTTTCCATGCGAGGATCCGTTGCTTGTGTTCACAAGAAAATATGACTAG 2997 0.3694 MSVYFMPMATIALSLNSKTDKLALLALKEKLTNGVPYYLPSWNESLHFCEWEGITCGRRHMRVTALHLENQTFGGTLGSSLGNLTFLQKLSLSNVNLHGEIPTQVGLLKRLRVLLFGNNNLQGEIPIELTNCTNIKVIDLPFNKLIGRVPAYFGSMMQLTWLSLGHNNLVGTIPSSLGNLSSLEKLSFRQNHLEGSIPYSLGRLSVLTWLSLGVNNLSGEIPHSLYNLSNIQMFSIDSNKLFGSIQSNIDLVFPNLERFFIGSNQISATFPSSISNLTGLQVFDKSSNNINGPLPLTLGRLNKLEWLNIGGNYLGSGGSHDFDFLPLLTNCTQLSRIYLYDNNFGGVLPNLIGNFSTNLQFLHMEYNQIYGVIPKTIGQLIGLVALTISYNLLEGAIPDSIGKLKNLGSLALDDNKFIGNIPLVIGNLTFLNGIYLSNNKFEGSIPFTIRNCTKLQGLYFNSNKLSGDILNQTFGYLDALIFFDLSNNLLTGPIPSEFGNLKQLSQLDLSLNKLSGEIPKDLASCIALTELWLGGNFFHGAIPLFFGSSLRSLEKLNLSENNFSGIIPSELENLTYLNSLDLSFNNLYGEFPKGGVFSNVSAILLTGNKNLCGGISPLKLPPCFKVPSKKHKNPFKRKLIIGSVVGGVLISFAVLIILYFLARKSKRLPTLPSSKNGNFRVTYGEIHEATNGFSSSNLVGTGSFASVYKGSLLYFERPIVVKVLNLQARGATKSFTAECKALGKMKHRNLVKILTCCSSVDYKGDEFKAIVFEFMPKGSLEKLLHDNEESGIHNLSLTQRVDIALDVAHALDYLHNGTENVVVHCDVKPNNVLLDDDMVAHLGDFGLARLIHGATAYSSVDQVNSSTIKGTIGYVPPEYGAGGQVSPHGDIYSYGILLLEMLTGKRPTNSMSSIRNVPDGIFEIVDSHLLLPFAEDETGIVENKIRNCLVMFAIIGVACSEEFPSYRMPIKDVIAKLNEIKSMFPCEDPLLVFTRKYD* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2434 998 SMART LRR_typ_2 204 228 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 253 277 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 574 599 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 156 180 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 501 525 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 108 132 IPR003591 -
Mtr2g2434 998 SMART LRR_typ_2 550 573 IPR003591 -
Mtr2g2434 998 SUPERFAMILY L domain-like 356 613 - -
Mtr2g2434 998 ProSiteProfiles Protein kinase domain profile. 693 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2434 998 SMART serkin_6 693 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2434 998 Gene3D Transferase(Phosphotransferase) domain 1 775 986 - -
Mtr2g2434 998 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Mtr2g2434 998 Gene3D Ribonuclease Inhibitor 15 251 IPR032675 -
Mtr2g2434 998 Gene3D Phosphorylase Kinase; domain 1 659 774 - -
Mtr2g2434 998 Pfam Leucine rich repeat N-terminal domain 18 56 IPR013210 -
Mtr2g2434 998 SUPERFAMILY Protein kinase-like (PK-like) 671 987 IPR011009 -
Mtr2g2434 998 Gene3D Ribonuclease Inhibitor 321 624 IPR032675 -
Mtr2g2434 998 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 986 - -
Mtr2g2434 998 Gene3D Ribonuclease Inhibitor 252 320 IPR032675 -
Mtr2g2434 998 Pfam Protein kinase domain 695 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2434 998 SUPERFAMILY L domain-like 44 355 - -
Mtr2g2434 998 PANTHER LRR RECEPTOR-LIKE KINASE 14 986 - -
Mtr2g2434 998 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Mtr2g2434 998 Pfam Leucine rich repeat 528 587 IPR001611 GO:0005515
Mtr2g2434 998 Pfam Leucine rich repeat 254 314 IPR001611 GO:0005515
Mtr2g2434 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2434 Mtr-Chr2 36668190 36671337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2434 18 984 Receptor kinase-like Gene Family AT3G47570 42.366 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr2g2434 Pkinase 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2434 - - mtr:MTR_1g029940 1339.32