Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2408 ATGGCTGCGGAAACATTTCCATACCAAAACGGCGTTGTTGCGAAAAAGTCGAAGGAGAACGATCGGCGTCGCCGTCGCGGGAAGGCGAAGAAAAACAACAAAGCTTCTGAGCAGCCAGCTTCTAACATCGGCGAAGATAGTGACAATGCTAAGGAGAATACTGATCCGAAGCAGGTTTTTGAACAAGTTGAAATTGAGTATGTACCAGAGAAGGTAGACCTATACGAAGGCATGGATGAAGAATTTAGAAAAATATTTGAGAAATTTAGTTTCACTGATGTCGCTGCATCAGAGGAAACTGATAAGAAGGATGTGGCGGAGGAAACTGCAGCTACTAAAAAGAAAGCTAATTCCGATTCTGATTATGAGGATGAAGAAAATGATAATGAGCAAAAAGAAAAAGGCGTATCAAACAAGAAGAAAAAGGTGAAGCAATTTTTAGCATGTAAAAAATTCTATAAACTCAAATTGGTGGCTAGCAAAGGGGTGACCATGGATGTTATCATGGGAGTTATTACTAACTTTGCTACTAAAACTGCCGAATTTACGGTTGAAGCTATTGGTCGTCAATTTGGTTACATACTTTATTACAAGGGCAACCTTACCAGGATGACAACTGATGTCCAACGTGTGGAGGGAATAAAAGACATTTTGCAACACAATGTTGATGAGGTCAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAGAATTGGTTGAACACAGTGGACAACACTGTTGCGGAGGCAAATGAACTTATTGACAGTGAAGGCCATGCAAAAGCTCAATGTTCTATGAGACATTTTCCCAATTTGTGCACAAGGCACCAGCTAAGTAGGAAGATGATAAAGATGATGCAAAAGATTTCTGAACTCGTAGCAGAAGGAAGTTTTGATAAAATTTCTTACCGTGCTGCTTCTCAAATCACAGTTATGCCGTTTGGTAGAGGTTATGAGGCCCTTGAATCAAGAACATCAATGTTGAATGAGATTATACTGGCATTGAAGGATCCTAGCATATTCATTGTTGGGGTGTATGGAATGGGTGGTGTGGGGAAGACAACACTGATGGAAGAGTTATCTTGGAAAGCGAAGAATGATGGGTCATTTAGTACTATTGTTATGGCTACTATAACAAGTTCACCAAATCTTGAAACAATTCGATGCCAAATTGCTGAAGCCTTGGATTTCAAGTTTAATAAGAAGACAGAAGAAGGAATGGCAAGAGAATTACGTGATAGGATAACCAAGGAGAAGCGTATTCTTGTTATTTTGGATGACATTTGGGGGAGACTTGATTTGACAGAACTAGGGGTTCCTTTTGGTAATGATCACAAAGGATGCAAATTGGTGGTGACATCCAGAGATCTTAATGTGTTGATTTGTGAGATGCGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGAGGATAGCTGGAAATTGTTTGAGAAGATGGCAGGTGATGTTGTTCACGAATTCAATATAAAACCAATTGCGATAAAGGTTGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTCACTACGGCAAAGGCTTTGAGGAAAAAACAAGTCTCTAATTGGAAGGATGCCTTAAATGAATTACAGAGATTTGATCAAGAAGGGTTGCATAAGAAAGTTTACTCTACTCTGGAATTGAGTTATAATTGTTTAGAGAGTGAAGAACTGAAGTTGCTATTCTTATTAATTGGTTCCTTTGGACTGGATTACCTCTACACTGGACCACTTTTTGTATGTTATTGGGGGTTGGGCTTATTTACACTTTCTCACAAATTGGCAGATGCAAGAATCAGATTCAACAGATTAATAAATGACCTTAAGGCATCTTCATTGTTACTTGAGTCTGAATTTGATCGGGTTAGAATTCATGATTATGTAAGAGATATGGCTAAATCAATTGCATGTAGGACTCGACCAACCTATGGGGTGAAAAGGTACACTAAAGTAAATCAATGGCCTGGGATGGATGAGCTTCGAAAATGCCATCAGATCATCCTTCCTTGGTCTTATATTTACAAGCTTCCTGAGAAGTTGAAGTGCCCAGAGTTGAAGCTAAAGGTCATTAGTTTATATGGAATGATGTTTGCCCCCTCTCCACCAACTTCACTATGTCTCTTGACGAAACTCCAAACATTGGTTCTTACTGGATGTGTGTTAGAAGACATATCAATAGTTGCAGAGTTGAAAAGTTTAGAGATTCTCAGGCTTGAAAGATCTGATATTAAAGAGCTCCCAAAAGAAATAGGACAACTAAATAATCTTCGAATGTTGAATCTAACCAACTGTTCTGCATTGAGATTCATTCCTGCAAATCTTATTTCCAGCTTAACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATTCAATGGGATGTCAAGGGAAGCAACGATCAAAGCAAAAATGCAAGTCTAGAAGAGCTAAGGAGTTTGTCTCATCTAACCGCTTTGGACATAATGACTCAAGATGCTTCAGTTTGGCCTAGGGACTTGCTAGTCTTTGAAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGAAATGGTCTTTGGACTGGTCTGGAAATGCATCTGAACCTGCCAGGATACTTAAGCTCAACGACAGTAGGGGTTCAAGCATTCTTTTGGATCGTGGATTTAACTCCTTGTTGAATTCAGCCGAGGACATGTGTATTTCCAAAATACATTGTGTTAGAAATGTTCTTTATGAGCTGAATAGGGGAGGTTTTCCGCAATTAAAACATTTGCGCCTTCAAGACAGCACTGAACTTCAGTACATCATTAATTCAACCGGGTGGGTTCATCCCTATCCTGCTTTACTCAACTTAGAGACTTTGGCTCTTCAAAATCTGTTTAATCTGGAAAAAATATGTCATGGGCCAATTCCAATTCAATCTTTTGTCAAACTAAAATCTTTTGAAGTCAAAGGTTGTGACAAATTGAAGAATCTGTTGCGGTATTCCCTTGTTAGAGACCTTCCTCAACTTCGTGAAATAAAAATTGCTGATTGCCAAATGATTACAGAAATCATATCTGAGGTGGATAAAGAAATTGACAAGATTATATTCCCTGAGTTGTGTTCTCTTGAACTTGAAAGTTTGCCTCGTCTCGTTAGTTTATGTGCGCCATTGACGCAGTGCATACATGTGCCACTAATTGATCAAAAGGTTGTGATGCCCCACCTTGAACTATTGAAGCTGTCTAACATCAATTGTGAGAAACTGTGGGATGACAAACTTCTGAGTCATTCTCGCATGCAAAACTTGAAGAGTTTGACAATGGACAAATGTGGTAGCATGAGATACGCATTCTCATCCTCAGTTGCTAGAGAACTTGTAAACCTGAAATCTCTTAAGATTAGTAATTGCCAAATGTTGGAGGAAATATTTGTCTCAGATGGAGAGTTGGGCAGTGTTCCTTTACCTCCAATGTTGGAGACATTTGAAATCTCCAACTCTAATGACGAGGATCTACTTCCAATGTTAGAGACATTTGAAATCTCCCACATGGAACACTTGAAGTCAGTATGGCACAATCAACTAGCCCCAAATTCCTTCTGCAAATTGAAGCAACTGAAAATTCAATTCTGCAATAAATTATCAAATATATTTCCATCTAATGTTCTTGATAAATTACAGAAGCTGGAGACAATGACTGTAACAGATTGTCCTAATCTGGAAGTTGTATTCGAAACACAAGGTCTAAAAGCAGATGGTGGTAGACAGATAAGGCTGGATATGCAATTGAAAACTCTCACTTTGAAGAATTTACCGATGTTGAAACACATATGGAGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACATCTGCCTATTGAAAGTTAATGAATGTAAAACCCTTAATCATGTCCTTCCCCTCTCTATGGCTAAAGAGCTTCAGCATCTCCAAGAAATTTATATTGAAGAATGTGGCATAGAGTTTATTGCAGCACATGATGAATTGGCTGACACATATCCGATACTTATTTTCCCAGAATTAACATCTTTGAGTTTTCGAGATTTGTCACAACTTCGAAGCTTCTCTCATAAATTACATACCTTGGATTGTCCTGTTTTAAGACATGTGGATGTCCTTCATTGTGACAAGCTTGTTCTATTCAAGCCAAAGTCTCTAAATTACCAAGAAATTGTTCCAGTTGATACAGTACCCCTTCTCTCAATCGAAAAGGTGCATTCTACATCTCAATACTCTGCCAATAAATGGCAGAAATACTTATACACACCAAAAAATACATTTTTAATAGATAAGTGGCGTGCTACTTGTTATTTTCTCATTGAAAAAGGGAGCAAAATTAGAGTGTTAGTTTTATTCCATGTTTTCTTAAAGTTCATATGA 4389 0.3823 MAAETFPYQNGVVAKKSKENDRRRRRGKAKKNNKASEQPASNIGEDSDNAKENTDPKQVFEQVEIEYVPEKVDLYEGMDEEFRKIFEKFSFTDVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKKKVKQFLACKKFYKLKLVASKGVTMDVIMGVITNFATKTAEFTVEAIGRQFGYILYYKGNLTRMTTDVQRVEGIKDILQHNVDEVRRNGEEIENIVQNWLNTVDNTVAEANELIDSEGHAKAQCSMRHFPNLCTRHQLSRKMIKMMQKISELVAEGSFDKISYRAASQITVMPFGRGYEALESRTSMLNEIILALKDPSIFIVGVYGMGGVGKTTLMEELSWKAKNDGSFSTIVMATITSSPNLETIRCQIAEALDFKFNKKTEEGMARELRDRITKEKRILVILDDIWGRLDLTELGVPFGNDHKGCKLVVTSRDLNVLICEMRTQKEFRLEVLLEEDSWKLFEKMAGDVVHEFNIKPIAIKVAKCCAGLPLLIVTTAKALRKKQVSNWKDALNELQRFDQEGLHKKVYSTLELSYNCLESEELKLLFLLIGSFGLDYLYTGPLFVCYWGLGLFTLSHKLADARIRFNRLINDLKASSLLLESEFDRVRIHDYVRDMAKSIACRTRPTYGVKRYTKVNQWPGMDELRKCHQIILPWSYIYKLPEKLKCPELKLKVISLYGMMFAPSPPTSLCLLTKLQTLVLTGCVLEDISIVAELKSLEILRLERSDIKELPKEIGQLNNLRMLNLTNCSALRFIPANLISSLTCLEELYMGNCFIQWDVKGSNDQSKNASLEELRSLSHLTALDIMTQDASVWPRDLLVFEKLERYNIFVGDMWKWSLDWSGNASEPARILKLNDSRGSSILLDRGFNSLLNSAEDMCISKIHCVRNVLYELNRGGFPQLKHLRLQDSTELQYIINSTGWVHPYPALLNLETLALQNLFNLEKICHGPIPIQSFVKLKSFEVKGCDKLKNLLRYSLVRDLPQLREIKIADCQMITEIISEVDKEIDKIIFPELCSLELESLPRLVSLCAPLTQCIHVPLIDQKVVMPHLELLKLSNINCEKLWDDKLLSHSRMQNLKSLTMDKCGSMRYAFSSSVARELVNLKSLKISNCQMLEEIFVSDGELGSVPLPPMLETFEISNSNDEDLLPMLETFEISHMEHLKSVWHNQLAPNSFCKLKQLKIQFCNKLSNIFPSNVLDKLQKLETMTVTDCPNLEVVFETQGLKADGGRQIRLDMQLKTLTLKNLPMLKHIWSGNPNESFKFQNICLLKVNECKTLNHVLPLSMAKELQHLQEIYIEECGIEFIAAHDELADTYPILIFPELTSLSFRDLSQLRSFSHKLHTLDCPVLRHVDVLHCDKLVLFKPKSLNYQEIVPVDTVPLLSIEKVHSTSQYSANKWQKYLYTPKNTFLIDKWRATCYFLIEKGSKIRVLVLFHVFLKFI* 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2408 1462 MobiDBLite consensus disorder prediction 1 62 - -
Mtr2g2408 1462 PRINTS Disease resistance protein signature 342 357 - -
Mtr2g2408 1462 PRINTS Disease resistance protein signature 415 429 - -
Mtr2g2408 1462 PRINTS Disease resistance protein signature 508 522 - -
Mtr2g2408 1462 PRINTS Disease resistance protein signature 758 774 - -
Mtr2g2408 1462 PANTHER RPP4C3 1258 1370 - -
Mtr2g2408 1462 PANTHER RPP4C3 165 1257 - -
Mtr2g2408 1462 MobiDBLite consensus disorder prediction 100 121 - -
Mtr2g2408 1462 Coils Coil 122 142 - -
Mtr2g2408 1462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 321 571 IPR027417 -
Mtr2g2408 1462 Gene3D - 312 471 IPR027417 -
Mtr2g2408 1462 MobiDBLite consensus disorder prediction 100 136 - -
Mtr2g2408 1462 SUPERFAMILY RNI-like 1044 1238 - -
Mtr2g2408 1462 Pfam NB-ARC domain 326 558 IPR002182 GO:0043531
Mtr2g2408 1462 Gene3D Ribonuclease Inhibitor 667 1064 IPR032675 -
Mtr2g2408 1462 PANTHER - 1258 1370 - -
Mtr2g2408 1462 PANTHER - 165 1257 - -
Mtr2g2408 1462 MobiDBLite consensus disorder prediction 48 62 - -
Mtr2g2408 1462 Gene3D Ribonuclease Inhibitor 1069 1246 IPR032675 -
Mtr2g2408 1462 SUPERFAMILY L domain-like 630 1056 - -
Mtr2g2408 1462 Gene3D - 474 561 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2408 Mtr-Chr2 36236446 36245545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2408 340 658 WRKY Transcription Factor Family AT5G45050 28.485 3.11e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2408 - - mtr:MTR_2g071870 2399.78